Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01178 ATGGAAAGTGATGCCCAAGACACCTTTGGCTCTTCCTCTTCATCTCCATCTTCTTCTTCTTCTTCTTTATCGTCAAACTCAGATTCTACAGGTACCAATAAGAGACACTCAAGAGGTGTTTCAGATCAGAATGGTGATGATAGCTGCAACAACAACAAGAAGCAGATCAGAAGTGAAGAAAAGGATCATAATGAAAATAACAAAAATAATGATAATGATAAGCTTCCAGCTTACAGAGGTGTGAGAATGAGGAACTGGGGAAAATGGGTTTCTGAGATTCGTGAGCCCAGAAAGAAATCCAGAATATGGCTTGGAACTTACCCTACTGCGGAAATGGCGGCTCGAGCTCACGATGTCGCGTCTTTAGCCATCAAAGGTCATTCGGCTTTCCTCAATTTCCCTCACTTGGCTTTGGTGCTTCCCAGGCCGGCCACCACCGCCCCAAAGGACATCCAAGCCGCCGCCGCAAAGGCTGCAGCTACTGTCTTTGAGGTGTCAACTAATGATAATCATTGTAATCAAGCTGGGGAGGCTGGGGCCGAGCCGGCCTCGTCATCGTCTTCGGCTCAAGACCAGTATTGTTGTTCTTCAAAGGAAGAGGACGCTTCTTTGTTTGACCTACCAGATCTTTTCAGTGATGGCAACAATGGCCTTTGTTCTTATGCTTCTGCTTCTTCTTCCTCTTCTTCTTCTTGGAATTTCAGGCTTGAAGAGCCATTTCTATGGGAAAATTACTAG 738 0.4566 MESDAQDTFGSSSSSPSSSSSSLSSNSDSTGTNKRHSRGVSDQNGDDSCNNNKKQIRSEEKDHNENNKNNDNDKLPAYRGVRMRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVASLAIKGHSAFLNFPHLALVLPRPATTAPKDIQAAAAKAAATVFEVSTNDNHCNQAGEAGAEPASSSSSAQDQYCCSSKEEDASLFDLPDLFSDGNNGLCSYASASSSSSSSWNFRLEEPFLWENY 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01178 245 ProSiteProfiles AP2/ERF domain profile. 77 134 IPR001471 GO:0003700|GO:0006355
Accr7g01178 245 MobiDBLite consensus disorder prediction 52 76 - -
Accr7g01178 245 SMART rav1_2 77 140 IPR001471 GO:0003700|GO:0006355
Accr7g01178 245 CDD AP2 78 136 IPR001471 GO:0003700|GO:0006355
Accr7g01178 245 PRINTS Ethylene responsive element binding protein signature 100 116 IPR001471 GO:0003700|GO:0006355
Accr7g01178 245 PRINTS Ethylene responsive element binding protein signature 78 89 IPR001471 GO:0003700|GO:0006355
Accr7g01178 245 FunFam Ethylene-responsive transcription factor 2 77 135 - -
Accr7g01178 245 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 37 216 - -
Accr7g01178 245 Gene3D AP2/ERF domain 77 135 IPR036955 GO:0003700|GO:0006355
Accr7g01178 245 SUPERFAMILY DNA-binding domain 77 135 IPR016177 GO:0003677
Accr7g01178 245 Pfam AP2 domain 76 127 IPR001471 GO:0003700|GO:0006355
Accr7g01178 245 MobiDBLite consensus disorder prediction 1 76 - -
Accr7g01178 245 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01178 Accr-Chr7 23972759 23973496 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01178 68 241 AP2-EREBP Transcription Factor Family AT2G44940 51.961 2.81e-60 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr7g01178 AP2 1.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01178 - - gmx:100801129 195.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr7g01178 7 23972759 23973496 Accr7g01178 7 23972759 23973496 ECH