Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01159 ATGACATCCCCCTTCTTGATTTCCGAAGACTTGATGGAAGATATGTTTGATATCAATTTTATTGTCATTCGACGAGGGGTTTCACCCAACACAAGATGCCTTCAAATAACACATTCTGAAGTATTTCCATCTCCTTTCACCATGCCTTGTGAAGAATTAATTCGAGATGTTTCAACTTTTCTACGTGGAAATGTAGGCAACTATCTTTCAGAAAATGGTGTTAGGTCATTAGCATCTCAAATCATATCTTACTACCAAGAAGTAATCAATCGTTTCACCATTAGAAGTACTCATCACCGCTTAATACCTCTACTTGTGCATTTTATTGTTGATACATCCTCAATACCTTTGTCTTTTCATCTTGAAATCAACACTCTTTTTGGAGACAATGAATACAGTGAGCATATGATGGATATTCTTAGTGATGATGAGTCAATAGAAATTTATGGTGTCATGGGCTCATCCAATCAACAATCTTCTACTAACGATGATATTGAGTCAACAGAAATCAATCAAGTAATAGAGCAATCCATGCAGCACTTCTCTATGGTTCTTGCTACAAAGAAAGCTATGGCGGCATCACTCAAGAAGATGGAAATATTCTCCGATAATATAAAGACAAGCACATGTAGCATTTGCTTAGAAGCTTTTGACGATGAGGAGGGTGATGACGTTTTAGCACTGCCTTGTGACCATTTTTTCCACAATGATTGCATTGTAGGATGGCTAAAAATAGGCCATACATGCCCATTGTGTCGCTTTCAACTGCCTATGTGA 777 0.3745 MTSPFLISEDLMEDMFDINFIVIRRGVSPNTRCLQITHSEVFPSPFTMPCEELIRDVSTFLRGNVGNYLSENGVRSLASQIISYYQEVINRFTIRSTHHRLIPLLVHFIVDTSSIPLSFHLEINTLFGDNEYSEHMMDILSDDESIEIYGVMGSSNQQSSTNDDIESTEINQVIEQSMQHFSMVLATKKAMAASLKKMEIFSDNIKTSTCSICLEAFDDEEGDDVLALPCDHFFHNDCIVGWLKIGHTCPLCRFQLPM 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01159 258 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 155 258 IPR013083 -
Accr7g01159 258 ProSiteProfiles Zinc finger RING-type profile. 210 253 IPR001841 -
Accr7g01159 258 SMART ring_2 210 252 IPR001841 -
Accr7g01159 258 SMART ringv_2 209 253 IPR011016 GO:0008270
Accr7g01159 258 CDD RING-H2_PA-TM-RING 209 253 - -
Accr7g01159 258 SUPERFAMILY RING/U-box 198 256 - -
Accr7g01159 258 PANTHER TARGET OF ERK KINASE MPK-1 144 256 - -
Accr7g01159 258 Pfam Ring finger domain 209 253 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01159 Accr-Chr7 23419213 23419989 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01159 169 257 C3H Transcription Factor Family AT1G18760 34.066 6.11e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01159 - K11982 pcin:129298469 209.534