Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01155 ATGACATCCTCCTACGTCCCAATTTCCGGAGATTTCATAGAAGATATGTTTGATATTGATTTTATTGTCATTCAAATCAGTGATCCCAATGATCTATTTGAAATTTTTAGTCATGATGATGAGTCAATAGAAATCTACAGTGACATGGGCTCATCAGATCAACAATCTTCTACTAACGATGATTTTGAGTCAACAGAAATCAATCAAGTAATAGAGCAATCCATGCAGCACTTCATCATGGTTCCGGCTACAGAGAAAGCTATGGCAGCATCACTCAAAAAGATGGAAAAGTTGGACGATAATATAAAGACAAGCACATGTAGCATTTGTTTAGAAGCTTTTGATGTTGATGAGGAAGGCGACGATATTTCAGCATTGCCCTGTGACCATTTTTTCCATGACAATTGCATTGTAGGATGGCTAAAAATGGGCCATACATGCCCATTGTGTCGCTTTCAACTGCCTATGTAA 471 0.3779 MTSSYVPISGDFIEDMFDIDFIVIQISDPNDLFEIFSHDDESIEIYSDMGSSDQQSSTNDDFESTEINQVIEQSMQHFIMVPATEKAMAASLKKMEKLDDNIKTSTCSICLEAFDVDEEGDDISALPCDHFFHDNCIVGWLKMGHTCPLCRFQLPM 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01155 156 SMART ring_2 107 150 IPR001841 -
Accr7g01155 156 Pfam Ring finger domain 106 151 IPR001841 -
Accr7g01155 156 CDD RING-H2_PA-TM-RING 106 151 - -
Accr7g01155 156 SMART ringv_2 106 151 IPR011016 GO:0008270
Accr7g01155 156 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 56 155 - -
Accr7g01155 156 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 155 IPR013083 -
Accr7g01155 156 SUPERFAMILY RING/U-box 106 154 - -
Accr7g01155 156 ProSiteProfiles Zinc finger RING-type profile. 107 151 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01155 Accr-Chr7 23362599 23363069 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01155 82 156 C3H Transcription Factor Family AT1G68180 40.000 6.05e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01155 - - pcin:129298469 142.124