Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01153 ATGCCTTGTGAAGAATTAATTCGAGATGTTTCAACTTTTCTACGTGGAAATGTAGGCAACTATCTTTCAGAAAATGGTGTTGGGTCATTAGCATCTCAAATCATATCTTACTACCAAGAAGTAATCAATCGTTTCACCATTAGAAGTGTTCATCACCGCTTAATACCTCTAATTGTGCATTTTATTGTTGATAGATCCTCAATACCTTTGTCTTTTCATCTTGTAATCAACACTCTGTTTGGAGATAATGAATACAGTGAGCATATGATGGATATTCTTAGTGATGATGATGAGTCAATAGAAATCTATAGTGCCATGGGCTCATCCGATCAACAATCTTCTACCAACGAGGATATTGAGTCAACAGAAATCAATCAAGTAATAGAGCAATCCATGCAGCACTTCTTTATGGTTCCTGCTACAGAGAAAGCTATGGCAACATCACTCAAGGAGATGGAAAAATTTTCCGATAATATAAAGACAAGCACATGTAGCATTTGCTTGGAAGCTTTTGATGATGAGGAAGGCGATGGCGTTTTAGCATTGCCTTGTGACCATATTTTCCACCATGATTGCATTGTAGGATGGCTAAAAATAGGCCATACATGCCCATTGTGTCGCTTTCAATTGCCTAGGTAA 639 0.3756 MPCEELIRDVSTFLRGNVGNYLSENGVGSLASQIISYYQEVINRFTIRSVHHRLIPLIVHFIVDRSSIPLSFHLVINTLFGDNEYSEHMMDILSDDDESIEIYSAMGSSDQQSSTNEDIESTEINQVIEQSMQHFFMVPATEKAMATSLKEMEKFSDNIKTSTCSICLEAFDDEEGDGVLALPCDHIFHHDCIVGWLKIGHTCPLCRFQLPR 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01153 212 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 96 211 - -
Accr7g01153 212 Pfam Ring finger domain 163 207 IPR001841 -
Accr7g01153 212 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 107 212 IPR013083 -
Accr7g01153 212 SUPERFAMILY RING/U-box 163 210 - -
Accr7g01153 212 ProSiteProfiles Zinc finger RING-type profile. 164 207 IPR001841 -
Accr7g01153 212 CDD RING-H2_PA-TM-RING 163 207 - -
Accr7g01153 212 SMART ring_2 164 206 IPR001841 -
Accr7g01153 212 SMART ringv_2 163 207 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01153 Accr-Chr7 23150708 23151346 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01153 161 211 C3H Transcription Factor Family AT1G18760 50.980 5.62e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01153 - - pcin:129298469 208.379