Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01144 ATGCAAGTGAAGAAGAAGGATCAAGGGCCTATAACGAAAGGGCCATGGAAAGCCGACGAAGACGAAGTGCTTCTAAGCCATGTCAACAAGTATGGCCCCAGAGACTGGAGCTCCATTCGATCCAAGGGCCTTCTTCAACGCACCGGAAAATCTTGCCGTCTCCGTTGGGTCAATAAGCTTCGTCCAAATCTCAAGAATGGGTGCAAATTTTCGCTGGATGAAGAGAGGGTGGTGATTGAGATGCAGGCACAATTTGGGAACAAATGGGCAAAGATTGCGTCTTATTTGCCAGGAAGAACAGATAATGATGTTAAGAATTTCTGGAGTAGTAGGCAAAAGAGGATCGCTAGGATTCTACATCCTTCACCACCACCATCGTCCAAATCAAAATCCAACAGGAACAAAAATAAAGTCCCCTGTTTCCACAATGTTCCTCCTCTGGAGGCACCTAAGTTTAGTTCTTCATCCGAGGAAGGATCTTCATCAAAGGCTAATCAGCCTCGCTCATCATCATCGTCCTTTACTGAGAATTCAGAGGTCATAAAGATGGTGACATTGCCTGATCTCATGAACTCCACCACCACCAACCCCTCGACGAGTTGTTCTGAGACGGTCACTTTGATCAAAGAAGAGTTTTCGACAACACCATTGGAGAGCTATATGAGCACCGACATCATAAGTTCAGGAATTGGTTTCCCTCAGATTTTCCCATTCTCAATGGAAAGTCAGGATCTCTTCTTGGCCAGAGCAAATGAGCCTGCTGGTTTCATTGATGGATTAGGTTTCGGAGAAGACCCTTTGGTTGGTGATGCATCAGAACTTGGAATAGGAACACAGATTCCCTTTTTAGGGTTTCCAAATTACTATGATTCATCAGGAAGTTGCAGAATTGGGACAAGGGATTCAAATGTGTACAACCCCACAAACCCTGAAAGCTTCTTTGATGATTTTCCAGATGATATGTTTGATCATCTTCAGCCACCTCAAAGCCCACCATCATCATCAGAGCTGTGA 1014 0.4477 MQVKKKDQGPITKGPWKADEDEVLLSHVNKYGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNLKNGCKFSLDEERVVIEMQAQFGNKWAKIASYLPGRTDNDVKNFWSSRQKRIARILHPSPPPSSKSKSNRNKNKVPCFHNVPPLEAPKFSSSSEEGSSSKANQPRSSSSSFTENSEVIKMVTLPDLMNSTTTNPSTSCSETVTLIKEEFSTTPLESYMSTDIISSGIGFPQIFPFSMESQDLFLARANEPAGFIDGLGFGEDPLVGDASELGIGTQIPFLGFPNYYDSSGSCRIGTRDSNVYNPTNPESFFDDFPDDMFDHLQPPQSPPSSSEL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01144 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 116 IPR017930 -
Accr7g01144 337 Gene3D - 68 140 - -
Accr7g01144 337 MobiDBLite consensus disorder prediction 149 177 - -
Accr7g01144 337 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Accr7g01144 337 PANTHER TRANSCRIPTION FACTOR DUO1 4 333 - -
Accr7g01144 337 FunFam MYB transcription factor 13 65 - -
Accr7g01144 337 CDD SANT 69 108 IPR001005 -
Accr7g01144 337 CDD SANT 15 60 IPR001005 -
Accr7g01144 337 MobiDBLite consensus disorder prediction 316 337 - -
Accr7g01144 337 MobiDBLite consensus disorder prediction 124 138 - -
Accr7g01144 337 Gene3D - 12 65 - -
Accr7g01144 337 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Accr7g01144 337 FunFam Transcription factor GAMYB 68 140 - -
Accr7g01144 337 Pfam Myb-like DNA-binding domain 16 72 - -
Accr7g01144 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 64 IPR017930 -
Accr7g01144 337 ProSiteProfiles Myb-like domain profile. 69 112 IPR001005 -
Accr7g01144 337 SMART sant 66 114 IPR001005 -
Accr7g01144 337 SMART sant 12 62 IPR001005 -
Accr7g01144 337 MobiDBLite consensus disorder prediction 116 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01144 Accr-Chr7 23005366 23007096 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01144 1 331 MYB Transcription Factor Family AT3G60460 46.356 5.80e-77 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr7g01144 Myb_DNA-bind_6 2.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01144 K09422 - gmx:100805384 323.553