Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01128 ATGTCGGCCTCATCATCAATCACTTCTTCCTTTTCACCGGACCACCACCTCTCTCCCTCCGACCAGCTCTGCTATGTCCATTGCCATTTCTGTGACACTGTTCTCGCGGTGAGTGTTCCTTGCACCAGCTTGTTCAAGACTGTTACCGTGAGATGCGGCCATTGCACCAACCTTCTGTCTGTTAATATGCGTGGCCTTCTTCCTTCTTCCAATCAGCTTCACCTCGGTCACACATTCTTCCCTCCTCAGAATCTCCTGGAGGAGATGCGAAATGTACCATCTTCAAACATACAGATGATGGGCCATCATCATCAGCTTCCACACGCTAATGACTCAGTTATGATCAGCACCATGCGAGGAGGAGGAGCAGGAGGAGTAGGACTTGAGGAAATCCCTAAACCTCCACCGCCACCAGTTAACAGACCTCCAGAAAAGAGACAGAGAGTTCCATCTGCTTACAACCGCTTCATCAAGGATGAGATCCAACGCATCAAAGCTGGGAATCCTGATATAAGCCACAGAGAGGCCTTTAGTGCAGCTGCAAAGAATTGGGCCCATTTCCCTCACATACACTTCGGACTCATGCCTGATCATCAACCCGTGAAGAAAGCAAATGTGCGCCAGGAAGGAGAAGCCGTGCTTATGAAAGAAGGGCATTTGGCACCCACAAACGTTGGTATATCACCCTTTTAA 693 0.4935 MSASSSITSSFSPDHHLSPSDQLCYVHCHFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLLPSSNQLHLGHTFFPPQNLLEEMRNVPSSNIQMMGHHHQLPHANDSVMISTMRGGGAGGVGLEEIPKPPPPPVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVRQEGEAVLMKEGHLAPTNVGISPF 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01128 230 CDD HMG-box_SF 148 184 - -
Accr7g01128 230 PANTHER PROTEIN YABBY 6-RELATED 5 206 IPR006780 GO:0007275
Accr7g01128 230 FunFam Axial regulator YABBY 139 211 - -
Accr7g01128 230 Gene3D High mobility group box domain 136 191 IPR036910 -
Accr7g01128 230 Pfam YABBY protein 19 194 IPR006780 GO:0007275
Accr7g01128 230 SUPERFAMILY HMG-box 135 188 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01128 Accr-Chr7 22564343 22568591 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01128 30 228 C2C2-YABBY Transcription Factor Family AT4G00180 61.215 1.65e-64 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Accr7g01128 YABBY 6.5e-71 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01128 K25796 - gmx:100781267 349.362