Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01127 ATGTCGGCCTCATCATCAATCACTTCTTCCTTTTCACCGGACCACCACCTCTCTCCCTCCGACCAGCTCTGCTATGTCCATTGCCATTTCTGTGACACTGTTCTCGCGGTGAGTGTTCCTTGCACCAGCTTGTTCAAGACTGTTACCGTGAGATGCGGCCATTGCACCAACCTTCTGTCTGTTAATATGCGTGGCCTTCTTCCTTCTTCCAATCAGCTTCACCTCGGTCACACATTCTTCCCTCCTCAGAATCTCCTGGTATATGAGGAGATGCGAAATGTACCATCTTCAAACATACAGATGATGGGCCATCATCATCAGCTTCCACACGCTAATGACTCAGTTATGATCAGCACCATGCGAGGAGGAGGAGCAGGAGGAGTAGGACTTGAGGAAATCCCTAAACCTCCACCGCCACCAGTTAACAGACCTCCAGAAAAGAGACAGAGAGTTCCATCTGCTTACAACCGCTTCATCAAGGATGAGATCCAACGCATCAAAGCTGGGAATCCTGATATAAGCCACAGAGAGGCCTTTAGTGCAGCTGCAAAGAATTGGGCCCATTTCCCTCACATACACTTCGGACTCATGCCTGATCATCAACCCGTGAAGAAAGCAAATGTGCGCCAGGAAGGAGAAGCCGTGCTTATGAAAGAAGGGCATTTGGCACCCACAAACGTTGGTATATCACCCTTTTAA 699 0.4907 MSASSSITSSFSPDHHLSPSDQLCYVHCHFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLLPSSNQLHLGHTFFPPQNLLVYEEMRNVPSSNIQMMGHHHQLPHANDSVMISTMRGGGAGGVGLEEIPKPPPPPVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVRQEGEAVLMKEGHLAPTNVGISPF 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01127 232 CDD HMG-box_SF 150 186 - -
Accr7g01127 232 Pfam YABBY protein 19 196 IPR006780 GO:0007275
Accr7g01127 232 Gene3D High mobility group box domain 138 193 IPR036910 -
Accr7g01127 232 FunFam Axial regulator YABBY 141 213 - -
Accr7g01127 232 PANTHER PROTEIN YABBY 6-RELATED 5 208 IPR006780 GO:0007275
Accr7g01127 232 SUPERFAMILY HMG-box 137 190 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01127 Accr-Chr7 22564343 22568591 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01127 30 230 C2C2-YABBY Transcription Factor Family AT4G00180 60.648 1.38e-62 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Accr7g01127 YABBY 8.8e-71 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01127 K25796 - gmx:100781267 344.354