Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01077 ATGGAGACGCGCGAGTGCAAGCTCTGCTTCAAAACCTTCGCTAATGGCAGAGCTCTGGGAGGTCACATGAGGTCTCACATGAAGAAGCTTCCTCTACCTTCCAAACCAGAGGAACCTCGATCACCTTCTCCGACCTTACTGAGTTTCGAGAGCGACTCGCCGTCTTCTTCTTCATCATCGGAAGATGAAGGAGACACCGATCTGAGCTATGTCTTAAGAGATGATCGGAAGAAGAGAATTCGCATGGTAGATCCTGAGTTTTCCTTTGTTGTGGATCCTAATGGCTCTGTGATTCAAGATAGAGAGAGCGACACGGAGACCGAGTCATCGAAGAAGCCAACTCAGAAACGATCCAAACGCGCTTGGAAACTCAGTAATTTCGATGATGATGATGACTACTGTCATAAGAAAATTCAGCAACAACAAACGGTGGCAAAGATCAAATCGAACAAACTGTGTAAGACCGAGCCGTGGATTGCGGAGGTTGAACCGGCGAGTTCGATCTCCGATACGACCACTGAAGAAGACGTCGCGTACTGGCTTATGATGCTTTCTAGAGATAAATGGAGGAGACAAAACGATCTGAAAGACCAATACAACGTCGTGGAGGAAGACGAGGACAAGGATGAGGATGAAGATGAAGATGATGAAGAAGACGATGGCGATGAATCCGAGGCAGCTTTTAAGTCGTTGAAATCCAAAAATTACGGTAAGTACACGTGTGAGACGTGCAAAAAGGTGTTTCGATCTTATCAAGCACTAGGTGGTCACAGAGCGAGTCACAAGAAGATCAAAGTGGAGCTCGAGAATCATAATAATGGAGGCACCCCATTTTCTTCTTCAACCTTCCATCAGAAAATTCATGAATGTCCAGTCTGTTTTAGAGTGTTTGCTTCAGGTCAAGCTCTTGGGGGACACAAGAGGACCCATCTTAGTGGTTCGTCGACATTACTACCCACCACTCGAGCTTCTACTAAACTGGTAGGAAATTTCATAGATCTTAACCTTCCTGCTCCAACAGCGGACGAAGACGATATCAGCCAAATCGACAATTCTGGGGTTTCAGATGCAGAGTTCCTGGTTCATCGCATCAGACAGTGA 1101 0.4623 METRECKLCFKTFANGRALGGHMRSHMKKLPLPSKPEEPRSPSPTLLSFESDSPSSSSSSEDEGDTDLSYVLRDDRKKRIRMVDPEFSFVVDPNGSVIQDRESDTETESSKKPTQKRSKRAWKLSNFDDDDDYCHKKIQQQQTVAKIKSNKLCKTEPWIAEVEPASSISDTTTEEDVAYWLMMLSRDKWRRQNDLKDQYNVVEEDEDKDEDEDEDDEEDDGDESEAAFKSLKSKNYGKYTCETCKKVFRSYQALGGHRASHKKIKVELENHNNGGTPFSSSTFHQKIHECPVCFRVFASGQALGGHKRTHLSGSSTLLPTTRASTKLVGNFIDLNLPAPTADEDDISQIDNSGVSDAEFLVHRIRQ 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01077 366 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 1 361 IPR044303 GO:0006355
Accr7g01077 366 MobiDBLite consensus disorder prediction 92 120 - -
Accr7g01077 366 ProSitePatterns Zinc finger C2H2 type domain signature. 290 310 IPR013087 -
Accr7g01077 366 ProSitePatterns Zinc finger C2H2 type domain signature. 6 26 IPR013087 -
Accr7g01077 366 ProSitePatterns Zinc finger C2H2 type domain signature. 241 261 IPR013087 -
Accr7g01077 366 Pfam C2H2-type zinc finger 4 29 - -
Accr7g01077 366 Pfam C2H2-type zinc finger 288 311 - -
Accr7g01077 366 Pfam C2H2-type zinc finger 239 263 - -
Accr7g01077 366 ProSiteProfiles Zinc finger C2H2 type domain profile. 4 31 IPR013087 -
Accr7g01077 366 ProSiteProfiles Zinc finger C2H2 type domain profile. 288 315 IPR013087 -
Accr7g01077 366 MobiDBLite consensus disorder prediction 99 120 - -
Accr7g01077 366 SUPERFAMILY beta-beta-alpha zinc fingers 5 261 IPR036236 -
Accr7g01077 366 SUPERFAMILY beta-beta-alpha zinc fingers 284 312 IPR036236 -
Accr7g01077 366 Gene3D Classic Zinc Finger 236 310 - -
Accr7g01077 366 MobiDBLite consensus disorder prediction 197 227 - -
Accr7g01077 366 SMART c2h2final6 288 310 IPR013087 -
Accr7g01077 366 SMART c2h2final6 239 261 IPR013087 -
Accr7g01077 366 SMART c2h2final6 4 26 IPR013087 -
Accr7g01077 366 MobiDBLite consensus disorder prediction 44 65 - -
Accr7g01077 366 MobiDBLite consensus disorder prediction 203 224 - -
Accr7g01077 366 MobiDBLite consensus disorder prediction 21 75 - -
Accr7g01077 366 ProSiteProfiles Zinc finger C2H2 type domain profile. 239 266 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01077 Accr-Chr7 19769981 19771081 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01077 1 349 C2H2 Transcription Factor Family AT3G60580 39.167 3.31e-61 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr7g01077 zf-C2H2_6 3.4e-10 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01077 - - pcin:129291551 509.99