Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01070 ATGTCATGGAATCCGACCGAGTCAAAGGCACAATTCACGGTGGCTCAGGATGGTTCCGGCAGCCACAGAACGATCGGAGCCGCCATAGAAGCAGTGAGGTCAATGGGTCACAATCGCCCCGAAAGAGTCATCATCCACGTCAAATCAGGAATCTACAACGAGAAGGTTGCGATCGGATACAGGCTCAAGAACTTGATGCTCGTCGGAGACGGCATCGACAAGACCATCATCACCGGCGCCAGAAGTGTCGCCCGCGGTTCCTCCACCGTCAGCTCCGCCACACTTGATGTATCGGGCGATGGATTTTGGGGAAGGGACATAACGATCGAGAACAGAGCAGGTCCACAGGATCACCAAGCCGTGGCGATGAAGGTGAGCTCTGATCTTTCCGTCTTCTACAGATGCAGCTTCAGAGGCTACCAAGACACACTCTACACCCACTCCAATCGTCAATTCTACAGAGACTCCATAATTTCCGGCACCGTTGACTTCATATTCGGCGATGCCGCCGTCGTCTTCCAGAAATGCGACATCCTCCTCCGGAAGCCAATGTCCCAGCAGTCCAATTTCATCACGGCACAGGGACGATCCGACCCGAACCAACCGACCGGGATCGTGATCCAAAACTGTAGGGTTAGGCCGGAGGGTTCCACCGGAGCAAGAAATTACCTGGGAAGGCCATGGCAGAAGTATTCAAGAACGGTGTTCATGAAGAATGATCTGGACGGTTGTATTGATCCGAAAGGATGGAGTGAGTGGAGTGGTGGTTTTGCATTATCGACTCTGTATTATGCAGAGTATATGAACAGTGGTGAAGGAGCTTCTACTCAGAATAGAGTGAATTGGCCTGGCTTTCATGTTCTGCGTTCTGCTTCTGAGGTTAGACTTTTCTCAGTGGATGAGTTTCTGCTCGGAGATAGGTGGATCCCAGCCACCGGCGTGCCCTTCTCTGCCGGTGTTTGA 963 0.5244 MSWNPTESKAQFTVAQDGSGSHRTIGAAIEAVRSMGHNRPERVIIHVKSGIYNEKVAIGYRLKNLMLVGDGIDKTIITGARSVARGSSTVSSATLDVSGDGFWGRDITIENRAGPQDHQAVAMKVSSDLSVFYRCSFRGYQDTLYTHSNRQFYRDSIISGTVDFIFGDAAVVFQKCDILLRKPMSQQSNFITAQGRSDPNQPTGIVIQNCRVRPEGSTGARNYLGRPWQKYSRTVFMKNDLDGCIDPKGWSEWSGGFALSTLYYAEYMNSGEGASTQNRVNWPGFHVLRSASEVRLFSVDEFLLGDRWIPATGVPFSAGV 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01070 320 ProSitePatterns Pectinesterase signature 2. 158 167 IPR033131 -
Accr7g01070 320 PANTHER PECTINESTERASE 10 310 - -
Accr7g01070 320 Gene3D - 5 320 IPR012334 -
Accr7g01070 320 FunFam Pectinesterase 5 320 - -
Accr7g01070 320 Pfam Pectinesterase 12 306 IPR000070 GO:0030599|GO:0042545
Accr7g01070 320 SUPERFAMILY Pectin lyase-like 8 319 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01070 Accr-Chr7 19528460 19529524 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01070 1 320 Carbohydrate Esterase AT3G60730 63.692 1.33e-155 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01070 K01051 - gmx:100792852 487.648