Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01053 ATGGAAGCAAGAGAAGGAATTAGTTCAGGGGTTACGGTAATTGGAGCAGAAGCTCCATCAGCCTATCACGTTGCACCGAGAACCGAAGCACCAAGCCAGACCCAAGTTCATGATGTACCAGCAGCGGCACCAAATGTTGGTGCCTCACCGGGGAATGTTGGATTGGATGCAACATCGGTCAAGAAGAAACGGGGTAGACCAAGGAAGTATGGTCCCGACGGGTCTGTGGCTATGGCATTGTCACCTCTGCCAATTTCTTCTTCTGCGCCACTTTCTAATGACTTCTCATCTGGGAAGCGGGGCAAATCAGCTGGAATGGAGTACAAGAAACATAAGAAACTTGGATTGGAGCATTTGGGTGATTTGAATGCCTGCTCCCTTGGTACAAACTTCATGCCTCATATCATCACAGTCAATACTGGCGAGGATATTACAATGAAGGTTATTTCTTTTTCTCAACAAGGACCCCGGGCTATATGCATTCTCTCTGCTACTGGTGTGATTTCAAATGTTACACTTCGTCAACCTGATTCTTCAGGGGGTACTTTGACCTATGAGGGTCGCTTTGAGATACTGTCGCTGTCTGGATCATTCATGCCTACTGATAATCAAGGAACAAGAAGCAGGTCGGGTGGAATGAGTGTCTCTTTGGCAAGCCCTGATGGTCGTGTTGTAGGCGGTGGAGTTGCTGGTCTTCTTATAGCTGCCAGTCCTGTGCAGGTGGTGGTGGGAAGTTTTCTACCAAGCAATCAGCAAGACCCGAAACCAAAGAAGACCAAATCTGATTATGCCCCACCTGCTAGTGTTACCCCACCAACTGTCCCTGTTTCTTCGGCGCCGCCCTCAACTAATGCTGAAAAAGAAGGCATGGGTGGTGGACATGTCCTGCAAAATTCTGGAAACCTGAATTCCAGCATGACGTCTCCCTCGACATTCCGACGAGATAACTGGGTGAATATGCACTCTATGCCAGATTTGAGACAGTCGGCTACCGACATTAACATCTCCCTCCCAGATAGTTGA 1023 0.4839 MEAREGISSGVTVIGAEAPSAYHVAPRTEAPSQTQVHDVPAAAPNVGASPGNVGLDATSVKKKRGRPRKYGPDGSVAMALSPLPISSSAPLSNDFSSGKRGKSAGMEYKKHKKLGLEHLGDLNACSLGTNFMPHIITVNTGEDITMKVISFSQQGPRAICILSATGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTDNQGTRSRSGGMSVSLASPDGRVVGGGVAGLLIAASPVQVVVGSFLPSNQQDPKPKKTKSDYAPPASVTPPTVPVSSAPPSTNAEKEGMGGGHVLQNSGNLNSSMTSPSTFRRDNWVNMHSMPDLRQSATDINISLPDS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01053 340 ProSiteProfiles PPC domain profile profile. 128 267 IPR005175 -
Accr7g01053 340 Pfam Plants and Prokaryotes Conserved (PCC) domain 133 246 IPR005175 -
Accr7g01053 340 MobiDBLite consensus disorder prediction 296 316 - -
Accr7g01053 340 Gene3D - 133 262 - -
Accr7g01053 340 MobiDBLite consensus disorder prediction 22 76 - -
Accr7g01053 340 CDD DUF296 133 246 IPR005175 -
Accr7g01053 340 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 30 308 IPR039605 GO:0003680
Accr7g01053 340 MobiDBLite consensus disorder prediction 247 316 - -
Accr7g01053 340 SUPERFAMILY AF0104/ALDC/Ptd012-like 131 251 - -
Accr7g01053 340 FunFam AT-hook motif nuclear-localized protein 1-like 133 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01053 Accr-Chr7 19309824 19314525 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01053 10 279 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 56.908 7.80e-99 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01053 - - gmx:100796830 496.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr7g01053 7 19309824 19314525 Accr7g01053 7 19309824 19314525 ECH