Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01052 ATGGATTATTGTGGGTCTAGTAAGAATAATGATAAGAATGGTGGTGATGAAGGTGGTCAGAGTCAGAGAGGACCGTGTGGGGCGTGCAAGTTCCTGAGACGAAGGTGCGTGAAGGGGTGTGTATTTGCACCCTACTTTGACTCCGATCAAGGCACGGCTCAGTTCGCGGCGGTGCACAAGGTGTTCGGAGCAAGCAACGCCGCCAAGCTTCTGCTGCGAATCCCTCCTCACCACCGTCTCGACGCCGTCTTCACTCTCTCCTACGAGGCTCTCTCTAGGGCTCGTGATCCTGTCTATGGCTGCGTCGCTCACATCTTCGCCCTTCAACAACAGGTGATGAACTTGCAGGCAGAGTTAGCTTATGTGCAAGCCCGTCTATCGACGTTACAGCGTTTGCCGGCGATGGCGGCCGCAACTCTTCCTCAGCTTGAAATCTCTTCATCTTCTAACAATGACTTTCCGTTTGATCCAACTAATTCACTTCAGTTCTCAAATTTTCTCAACCCTTGTGATTTGCAACATGATTGGGATCTTCAAGCTTTAGCCAGAGATTTAGTATCAAGGTAA 567 0.5026 MDYCGSSKNNDKNGGDEGGQSQRGPCGACKFLRRRCVKGCVFAPYFDSDQGTAQFAAVHKVFGASNAAKLLLRIPPHHRLDAVFTLSYEALSRARDPVYGCVAHIFALQQQVMNLQAELAYVQARLSTLQRLPAMAAATLPQLEISSSSNNDFPFDPTNSLQFSNFLNPCDLQHDWDLQALARDLVSR 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01052 188 PANTHER LOB DOMAIN CONTAINING PROTEIN 22 144 - -
Accr7g01052 188 Pfam Lateral organ boundaries (LOB) domain 25 123 IPR004883 -
Accr7g01052 188 Coils Coil 112 132 - -
Accr7g01052 188 MobiDBLite consensus disorder prediction 1 17 - -
Accr7g01052 188 MobiDBLite consensus disorder prediction 1 22 - -
Accr7g01052 188 ProSiteProfiles LOB domain profile. 24 126 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01052 Accr-Chr7 19276470 19282051 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01052 28 188 AS2 family AT2G45410 60.736 1.74e-63 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr7g01052 LOB 2.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01052 - - pcin:129289888 303.523