Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01050 ATGAGTACAAACTCGACCAGCACTGTTACTGGTGGTGTTGGGGGTGCTGGTGGGAGCTGCGGAGGAGGAGGGGGTAGCGGTGGAGGTGGGGGAGGGCCGTGCGGTGCGTGCAAGTTTCTGAGGAGGAAGTGCGCGCCAGGGTGTATCTTCGCGCCGTACTTCGACTCGGAGCAAGGAGCGACGCATTTCGCGGCGGTGCACAAGGTGTTTGGAGCGAGCAACGTGTCGAAGCTGCTTCTGAATATTCCGGTGCACAAGCGGCTGGACGCGGTGGTGACGATTTGCTTTGAGGCTGAGGCACGGCTGAGAGATCCTGTCTATGGATGTGTCGCCAACATCTTCGCTCTTCAGCAACAGGTTGTGAATCTACAAGCAGAACTTTCTTACTTGCAAGGTCACCTTGCAACATTAGAGTTGCCCCAACCACCACCACTGCCACCACCTCCATTGCCGCTAGCAGTACCAACACCGACAACCCTCTCGATCGGTAACATCCCATCGGGCACACCCATCACCTCATCTCTCCCAGGGACATATGATTTATCTTCTCTTTTTGATCCGATGGTTCAAACTTCTTGGGCCCTGCCACAACGGGCCATGGACCTACGCCAATATGGGCCTAGCACTGGCTCACCCTCAGTAGGTGGCGGCGGCGGCGACGGTAGTGATCTTCATGTCCTAGCAAGAGAACTACTCAACAGACATGGGTCCTCTTCATCTTCAACACCTATGGCTTGCTCTAAAGCCTCCTCTTCGACATCACTTTCCAAATGA 774 0.553 MSTNSTSTVTGGVGGAGGSCGGGGGSGGGGGGPCGACKFLRRKCAPGCIFAPYFDSEQGATHFAAVHKVFGASNVSKLLLNIPVHKRLDAVVTICFEAEARLRDPVYGCVANIFALQQQVVNLQAELSYLQGHLATLELPQPPPLPPPPLPLAVPTPTTLSIGNIPSGTPITSSLPGTYDLSSLFDPMVQTSWALPQRAMDLRQYGPSTGSPSVGGGGGDGSDLHVLARELLNRHGSSSSSTPMACSKASSSTSLSK 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01050 257 MobiDBLite consensus disorder prediction 203 257 - -
Accr7g01050 257 MobiDBLite consensus disorder prediction 233 257 - -
Accr7g01050 257 Pfam Lateral organ boundaries (LOB) domain 33 131 IPR004883 -
Accr7g01050 257 PANTHER LOB DOMAIN CONTAINING PROTEIN 31 137 - -
Accr7g01050 257 ProSiteProfiles LOB domain profile. 32 134 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01050 Accr-Chr7 19233833 19247557 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01050 33 257 AS2 family AT2G45420 60.870 1.19e-76 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr7g01050 LOB 2.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01050 K21994 - qsa:O6P43_017484 281.952