Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01043 ATGGATCCAGTAGCTGCACAGGGTCGTCCTCTTCCACCACCTTTTCACACCAGAGATCTCCATCTTCATCCCCATCACCAATTTCATCAGACCCACCACAATAACAATCACTCCCCCGCCGCCGACGTGGACGAGCAGGCCGGTAATGGCAGATTGAACCGCGGTCAGAAGCGAGATCATGAGAACATCGCCACTGAGGGGAAGGAATTGGGTTCTAATAACACAGCTCCTGCGGGCGGAGATGCTGCCGCCGGAGGTGGCGGTGGGGGTGGGGATAATAGTGCGAGAAGACCTCGTGGTAGACCGGCCGGTTCGAAGAACAAGCCCAAGCCTCCGATCATCATAACGAGGGATAGCCCTAACGCGCTTAGGTCTCATGTCATGGAGATCGCTAACGGCGGAGATATCATGGACAGTGTGGCTACCTTCGCGAGGCGGAGGCAGCGTGGAGTTTGCATTCTGAGTGGGAGTGGCACCGTCACGAATGTCACCCTCCGGCAACCCGCTTCGCCCGGTGCAGTTGTGACCTTACACGGGAGATTCGAGATTCTATCACTCTCCGGCTCGTTCCTGCCGCCGCCGGCACCACCTGCCGCTTCTGGGATGGCCATATATCTGTCTGGCGGACAGGGTCAAGTCGTGGGAGGCACCGTGGTGGGGCCGTTGTTGGCGTCCGGGCCGGTGGTCATAATGGCTGCTTCGTTCGGAAATGCGGCGTACGAGAGGCTGCCGTTAGAGGAAGAAGAGACACAGCCCGTGGCGGCGGTGACTGGAAGCGGAGGGTTAGGCTCGCCGGGAATCGTTGGACAACAACAACAATCACAGCCACAACAGCAACAACAGAATCAAATCGTGGGAGATCCTAACACTACATCGATGTTTCATGGAGTTCCTCAGAATCTTCTGAATTCTTGCCAATTACCAGCTGAAGGATTCTGGGGTGGAGGCCACAACACTGTTCGTCCTCCATTTTAA 975 0.5662 MDPVAAQGRPLPPPFHTRDLHLHPHHQFHQTHHNNNHSPAADVDEQAGNGRLNRGQKRDHENIATEGKELGSNNTAPAGGDAAAGGGGGGGDNSARRPRGRPAGSKNKPKPPIIITRDSPNALRSHVMEIANGGDIMDSVATFARRRQRGVCILSGSGTVTNVTLRQPASPGAVVTLHGRFEILSLSGSFLPPPAPPAASGMAIYLSGGQGQVVGGTVVGPLLASGPVVIMAASFGNAAYERLPLEEEETQPVAAVTGSGGLGSPGIVGQQQQSQPQQQQQNQIVGDPNTTSMFHGVPQNLLNSCQLPAEGFWGGGHNTVRPPF 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01043 324 ProSiteProfiles PPC domain profile profile. 120 257 IPR005175 -
Accr7g01043 324 MobiDBLite consensus disorder prediction 51 66 - -
Accr7g01043 324 Pfam Plants and Prokaryotes Conserved (PCC) domain 124 236 IPR005175 -
Accr7g01043 324 MobiDBLite consensus disorder prediction 1 20 - -
Accr7g01043 324 SUPERFAMILY AF0104/ALDC/Ptd012-like 120 250 - -
Accr7g01043 324 FunFam AT-hook motif nuclear-localized protein 123 250 - -
Accr7g01043 324 MobiDBLite consensus disorder prediction 264 297 - -
Accr7g01043 324 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 38 304 IPR014476 GO:0003680
Accr7g01043 324 MobiDBLite consensus disorder prediction 250 297 - -
Accr7g01043 324 Gene3D - 123 254 - -
Accr7g01043 324 PIRSF ESCAROLA 17 323 IPR014476 GO:0003680
Accr7g01043 324 CDD DUF296 124 191 IPR005175 -
Accr7g01043 324 MobiDBLite consensus disorder prediction 26 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01043 Accr-Chr7 19071447 19072421 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01043 1 324 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 60.778 7.13e-85 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01043 - - gmx:100816243 382.874