Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01023 ATGACATCCTCTTACATTTCGATTTCTGAAGACTTGATGGAAGATATATTTGATATTAGTTTTACTGTCTTTCAACACGGGATTTCACCTAATACAGGGCTTCTTCGAGTGTTTATGTCCTCAATCACCATGCCCTATGAAGAATTAATTCGAGATGACCCAATATTTCTACAAAGAAATGTAGCCGGCTATCTTTCTAAAAACGATGTTAGGTCATTAGCATCAGAAATCATATCTTACCACCAAGAAGTAATCCGACGTACCACCATCAGAACTACTGAGCATCTCTTAATACCTCTAATTGTGCATCTTCATGTTGATTATGGCTTACTACCTTTGTTTTTTGGTCTTCAAACTACCACTCTATCAGGAGACAATGAATACAATGCCGGTAATGGTGATCAAGAGTCAACTGAAATCTATCATGGCGTTGACTCGTCCAATCAACAATCTTTTGATTATGACAATCAGCATATGATTAATACTACTGATGATCCTGAGTCCGCAGAAATCAATCACCTCCTAGAGGAATCCATGCAACACTTATTTATAGTTTCGACAACACAAGAAGCCATAGCACTATTGAAGAAGAAGAAAATTTCCGATGATAAAGTAAAGGAAGGCCAATGCAGCATTTGTTTAGAAGATTTTGTTGATCGTGGTGATGGTGATGATGCTTTAGTATTGCCCTGTGACCATTGTTTCCACAATAATTGTATTGTGAAATGGCTAAACACGGGTCATACATGTCCATTGTGTCGCTTTGAATTGCCTATAGAATAG 783 0.3742 MTSSYISISEDLMEDIFDISFTVFQHGISPNTGLLRVFMSSITMPYEELIRDDPIFLQRNVAGYLSKNDVRSLASEIISYHQEVIRRTTIRTTEHLLIPLIVHLHVDYGLLPLFFGLQTTTLSGDNEYNAGNGDQESTEIYHGVDSSNQQSFDYDNQHMINTTDDPESAEINHLLEESMQHLFIVSTTQEAIALLKKKKISDDKVKEGQCSICLEDFVDRGDGDDALVLPCDHCFHNNCIVKWLNTGHTCPLCRFELPIE 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01023 260 SUPERFAMILY RING/U-box 201 258 - -
Accr7g01023 260 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 152 258 - -
Accr7g01023 260 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 172 259 IPR013083 -
Accr7g01023 260 ProSiteProfiles Zinc finger RING-type profile. 210 254 IPR001841 -
Accr7g01023 260 CDD RING-H2_PA-TM-RING 209 254 - -
Accr7g01023 260 SMART ring_2 210 253 IPR001841 -
Accr7g01023 260 SMART ringv_2 209 254 IPR011016 GO:0008270
Accr7g01023 260 Pfam Ring finger domain 209 254 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01023 Accr-Chr7 18539015 18539797 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01023 209 260 C3H Transcription Factor Family AT1G18760 50.000 1.97e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01023 - - pcin:129298469 207.223