LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr7g01022	ATGATGGATGATGACATGGAGAGCGGTAGTTTAGGGCCTTACCAGGACAAACCAAGAACATTTCCCAACATGCGTAGTAAAGCCTATACCCCACTGATATTTCGTATTCTACTTGGTATAAATGTCCGTGTCCTGGTCATACTTTTGCTTCTGGGTCTTGGAGCTATCTTCTACATTGGAGCAAGCACATCTCCTATCATTGTGTTTGTCTTCTCTGTTTGTATTCTCAGCTTCCTTGTGGCAATATATCTTGCAAAGTGGGTGCTTGCGAAGGATGAGGGCCCTCCTGAAATGGTTCAGATATCAGATGCTATACGAGATGGAGCTGAAGGATTTTTCAAGACCCAATATGACTCTATATCCAAGATGGCAATGTTGCTTGCTCTGGTGATCCTTTGCATATATTTGTTCCGTAGTACAACTCCTCACATGGAGGCTTCTGGCCTGGGAAGGTCATCTTCTGCGTACATCACAGTAGCTGCATTCCTTATAGGTGCTCTTTGTTCTGGTGCTGCGGGATATGTAGGAATGTGGGTGTCAGTGCGTGCCAATGTTAGAGTTTCTAGTGCTGCAAGACGGTCTGCAAGAGAGGCGTTGCAGGTAGCTACTCGTGCTGGTGGTTTCTCAGCTATTGTTGTTGTTGGTATGGCTGTAATTGGTATAGCAATCCTTTATGCCACATTTTATGTTTGGTTGGGAGTGGACACACCTGGTGGAATGAAGGTTACCGATTTGCCTCTTCTTCTTGTTGGATATGGTTTTGGTGCCTCCTTTGTTGCATTGTTCGCACAGTTGGGTGGTGGAATATACACAAAGGCAGCTGATGTGGGAGCAGACCTTGTCGGAAAAGTGGAGCAGGGGATTCCTGAAGATGACCCTAGGAATCCTGCTGTAATTGCTGATCTGGTTGGAGACAATGTGGGAGATTGTGCGGCTAGAGGTGCTGATCTTTTTGAAAGTATTGCTGCTGAAATAATAAGTGCCATGATACTTGGGGGAACTATGGCAAAGCGGTGTAAAATAGATGATCCGTCTGGCTTCATCTTGTTTCCTCTTGTCGTTCACTCATTTGATCTGGTTGTTTCATCAATTGGAATATTTTCAATTAGGGGCACACGTGAGAGTGGTGTAAAAGCTCCCTTTGAGGATCCAATGACAATTCTTCAGAAAGGATACTCTGTTACAATAGTTTTAGCTGTCTTGACATTTGGTCTGTCTACTCGGTGGTTACTTTACACAGAACAAGCACCATCAGCATGGTTCAATTTTGCCATGTGTGGGTTGATTGGTATAATCACTGCTTACGTTTTTGTCTGGATAACCAAGTATTACACTGACTACAAGCATGAGCCTGTGCGTGCAATAGCCCTTTCTAGCACCACAGGTCATGGGACTAATATAATTGCTGGGGTCAGCTTGGGCCTGGAATCAACTGCTCTTCCTGTCCTTGTCATCAGTGTGTCAATTGTCTCTGCTTTCTGGCTGGGTCACAGCTCTGGACTAGTTGATGAAGCGGGAAACCCAACTGGTGGGCTGTTTGGTACAGCTGTAGCAACAATGGGAATGTTGAGCACCGCTGCTTATGTTCTTACCATGGATATGTTTGGTCCAATTGCTGATAATGCTGGAGGTATTGTAGAGATGAGTGAGCAGCCTGAAAGTGTCCGAGAGATCACTGATATTCTTGATGCAGTTGGAAACACAACCAAAGCTACAACTAAAGGATTTGCCATTGGTTCTGCTGCTCTCGCTTCTTTCCTTTTATTTAGCGCTTATATGGATGAGGTTTCCGCATTTGCACGAGAACCTTTTAAACAGGTTGATATTGCCATTCCAGAAGTTTTCGTTGGTGGGCTGTTGGGTTCGATGCTTATTTATCTGTTCAGTGCTTGGGCTTGTTCTGCTGTGGGCCGAACTGCTCAAGAGGTTGTTAATGAAGTAAGAAGGCAGTTCATTGAGAGGCCTGGCATTATGGAGTATAAGGAGAAACCAGATTATGGTCGATGTGTTGCTATCGTAGCATCTGCATCACTAAGGGAGATGATAAAACCCGGTGCTCTTGCCATCATTTCACCTATTGTAGTTGGATTTCTGTTCCGAATTTTGGGTTCCTATACAGGGCAGCCGCTACTTGGGGCTAAAGTTGTGGCCGCCTTTCTGATGTTTGCAACAGTTTCTGGTATTCTGATGGCACTCTTTCTGAACACTGCCGGTGGTGCCTGGGATAATGCAAAGAAGTACATTGAAACTGGAGTTCTTGGAGGCAAGGGTAGTGATGCTCACAAAGCCGCAGTAACCGGAGATACGGTGGGAGACCCGTTCAAAGACACAGCTGGGCCTTCACTTCATGTTGTTATCAAGATGCTTGCCACAATTACACTTGTTATGGCACCAGTGTTCCTGTGA	2406	0.4526	MMDDDMESGSLGPYQDKPRTFPNMRSKAYTPLIFRILLGINVRVLVILLLLGLGAIFYIGASTSPIIVFVFSVCILSFLVAIYLAKWVLAKDEGPPEMVQISDAIRDGAEGFFKTQYDSISKMAMLLALVILCIYLFRSTTPHMEASGLGRSSSAYITVAAFLIGALCSGAAGYVGMWVSVRANVRVSSAARRSAREALQVATRAGGFSAIVVVGMAVIGIAILYATFYVWLGVDTPGGMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAKRCKIDDPSGFILFPLVVHSFDLVVSSIGIFSIRGTRESGVKAPFEDPMTILQKGYSVTIVLAVLTFGLSTRWLLYTEQAPSAWFNFAMCGLIGIITAYVFVWITKYYTDYKHEPVRAIALSSTTGHGTNIIAGVSLGLESTALPVLVISVSIVSAFWLGHSSGLVDEAGNPTGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSEQPESVREITDILDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSAFAREPFKQVDIAIPEVFVGGLLGSMLIYLFSAWACSAVGRTAQEVVNEVRRQFIERPGIMEYKEKPDYGRCVAIVASASLREMIKPGALAIISPIVVGFLFRILGSYTGQPLLGAKVVAAFLMFATVSGILMALFLNTAGGAWDNAKKYIETGVLGGKGSDAHKAAVTGDTVGDPFKDTAGPSLHVVIKMLATITLVMAPVFL	801

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr7g01022	801	PANTHER	K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP	91	800	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Accr7g01022	801	PIRSF	H+-PPtase	60	801	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Accr7g01022	801	Hamap	Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA].	64	801	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Accr7g01022	801	Pfam	Inorganic H+ pyrophosphatase	75	796	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Accr7g01022	801	NCBIfam	V-type H(+)-translocating pyrophosphatase	68	800	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr7g01022	Accr-Chr7	18503845	18517080	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr7g01022	1	801	Primary Pumps ATPases	AT1G16780	86.517	0.0	1433

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr7g01022	K23025		-	gmx:100787805	1378.23