Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00974 ATGGGTTCTGTAGAGAAGGTAGACCTTGATTTTGATGAGGAGGTCCCTTTTAGCTCCTCAACAAATCCGGGGAAAGTCCATGCTTTTCAATCTGAGAAAGCTGAGAAAACTCAAGTGCTTTCTTCCGTAAATTTGGCCAGCTTATCCATATCCAAGCAAATAGGGATAAGACCTATTAGGAGCATATACGTTGTCTTAATTAAAGCGAAGATCAACATGTTGCTACCTTTTGGTCCCTTAGCCATATTGATACATTATCTAACAGGAAAGCATGGATGGGTGTTCTTCTTCACCTTACTGGGTATTACTCCTTTGGCGGAACGTCTGGGTTTTGCTACTGAGCAGCTGGCATATTTTACCGGACCAACAGTTGGGGGTTTGTTAAATGCCACATTTGGCAATGCAACTGAAATGATCATATCAATATATGCTTTGAAAAATGGGATGATTAGGGTTGTTCAGCAATCTTTACTGGGCTCAATCCTGTCAAATATGCTTCTTGTTCTGGGATGTGCATTCTTTACTGGTGGTATTGTCCATTCCCAAAAGGTTCAGGTTTTCAACAAGGCATCTGCTGTTGTGAATTCTGGGTTGCTATTGATGGCGGTAATGGGAATACTGTTTCCTGCTGTGCTTTACTTTACTCACTCAGAGGTTCACTTTGGCAAGTCAGAGATTTCTCTGTCCAGATTTAGTAGCTGTATAATGCTAATAGCATATGCTAGCTACCTTTTCTTTCAACTAAGAAGTGATCACAATAAATATAGTTCACTTGAAGAGGGAGGAGATAGTGATGAAAATTCTGATGAGGAAGAAGAATGTGAATTAACAAAATGGGAGGCGATAGGATGGCTTGCTATTTTAACAGCATGGGTTTCTATTTTGTCTGGATACCTTGTGGATGCCATACAGGGGGCATCTGAGTCATGGAATATGCCAGTGGCGTTTATTAGTGTCATATTGCTTCCAATTGTAGGAAATGCTGCAGAGCATGCGAGTGCTATCATGTTTGCCATGAAGGACAAGCTTGATATTACACTTGGAGTTGCTATTGGATCTTCTACTCAGATTTCTATGTTTGTGATCCCCTTTTGTGTGGTAGTTGGGTGGTGCATGGGAAAACCAATGGACTTGAATTTTCAACTCTTTGAGACAGCCACACTTTTTATCACCGTGCTCGTTGTCGCATTTATGTTGCAGGACGGGACATCTAATTATTTTAAAGGCTTGATGCTTATTCTATGCTATCTCATTGTTGCGGCCAGTTTCTTTGTACACGTGGACCCCAAAACCACCAAAAACAGTGGAGGCGAATGA 1317 0.4123 MGSVEKVDLDFDEEVPFSSSTNPGKVHAFQSEKAEKTQVLSSVNLASLSISKQIGIRPIRSIYVVLIKAKINMLLPFGPLAILIHYLTGKHGWVFFFTLLGITPLAERLGFATEQLAYFTGPTVGGLLNATFGNATEMIISIYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHSQKVQVFNKASAVVNSGLLLMAVMGILFPAVLYFTHSEVHFGKSEISLSRFSSCIMLIAYASYLFFQLRSDHNKYSSLEEGGDSDENSDEEEECELTKWEAIGWLAILTAWVSILSGYLVDAIQGASESWNMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVVGWCMGKPMDLNFQLFETATLFITVLVVAFMLQDGTSNYFKGLMLILCYLIVAASFFVHVDPKTTKNSGGE 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00974 438 Pfam Sodium/calcium exchanger protein 93 248 IPR004837 GO:0016020|GO:0055085
Accr7g00974 438 Pfam Sodium/calcium exchanger protein 282 421 IPR004837 GO:0016020|GO:0055085
Accr7g00974 438 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 39 429 IPR004713 GO:0006812|GO:0008324|GO:0016020
Accr7g00974 438 FunFam Vacuolar cation/proton exchanger 122 261 - -
Accr7g00974 438 FunFam Vacuolar cation/proton exchanger 269 425 - -
Accr7g00974 438 Gene3D - 122 262 IPR044880 -
Accr7g00974 438 Gene3D - 271 425 IPR044880 -
Accr7g00974 438 NCBIfam calcium/proton exchanger 64 424 - -
Accr7g00974 438 NCBIfam calcium/proton exchanger 74 424 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00974 Accr-Chr7 17268392 17273294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00974 30 429 Antiporters AT3G13320 72.973 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00974 K07300 - fve:101299212 667.922