Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00965 ATGGCGAAAATGTCACAGAGGAAGGTGAAGAATGATGAAAATAGCAACACGCCGTCAAACAAGAACACGAAACGGACTCGCAAAAGCATTCCCAGGGACTCTCCTCCGCAACGAAGCTCCGTTTATCGAGGCGTCACTAGGCATCGTTGGACGGGTCGTTATGAGGCTCATCTCTGGGATAAGAATTGCTGGAATGAATCGCAGAGCAAGAAAGGAAGACAAGTGTATTTAGGGGCATATGATGATGAAGAAACTGCTGCACGTGCCTATGACTTGGCAGCATTGAAGTACTGGGGCCAAGACACCATCCTCAATTTTCCTCTCACAAATTATGAACAAGAGCTCAAGGAGATGGGGGGTCAATCAAAAGAAGAATACATTGGATCCTTAAGAAGAAAAAGCAGTGGATTCTCAAGAGGAGTCTCAAAGTACAGAGGCGTAGCAAGACACCATCACAACGGAAGATGGGAGGCTCGGATTGGCAGAGTCTTCGGCAACAAATATCTTTATCTCGGAACTTACGCTACACAAGAAGAAGCAGCCACAGCTTATGATATGGCAGCCATAGAATATAGAGGACTTAACGCCGTTACAAACTTTGACCTCAGCCGTTATGTCAACTGGCCCCGTCCTAAAAGTCAACATTCACATGAAAACCCTACCACTGCTAACAGCACCGAGTCTGGATCAAGCTCTAATAATCCTGAACTTGAATTTGGTTTCGGGTCCCACCTGCTCAGTTCAAACTCCAACGACACACTGGCGGCGCCACCACAAACCGGTGGTGGAGCTCCGCCAACGTCATCGGCACTAGGGCTCCTCTTGCAATCGTCAAAGTTTAAGGAAATGCTGGAGAGGTCTTCATCAGGTGGAGATCAACATAACAATAATTACCCAGCAACAATAGAAACTTCAGAATCAAAGCCTCCTCGTCGTTCATTTCCTGAAGATATTCAAACATTCTTTGATTGTCATGATTCAAGCAGCTTCACTGAAACTGATGACATCATATTTGGTGATTTGAGCGCAATCGCTGCTCCTATTTTCCATGGCGAGCTTGATGCTTAG 1068 0.4607 MAKMSQRKVKNDENSNTPSNKNTKRTRKSIPRDSPPQRSSVYRGVTRHRWTGRYEAHLWDKNCWNESQSKKGRQVYLGAYDDEETAARAYDLAALKYWGQDTILNFPLTNYEQELKEMGGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYVNWPRPKSQHSHENPTTANSTESGSSSNNPELEFGFGSHLLSSNSNDTLAAPPQTGGGAPPTSSALGLLLQSSKFKEMLERSSSGGDQHNNNYPATIETSESKPPRRSFPEDIQTFFDCHDSSSFTETDDIIFGDLSAIAAPIFHGELDA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00965 355 Gene3D AP2/ERF domain 142 203 IPR036955 GO:0003700|GO:0006355
Accr7g00965 355 Gene3D AP2/ERF domain 41 109 IPR036955 GO:0003700|GO:0006355
Accr7g00965 355 SMART rav1_2 41 113 IPR001471 GO:0003700|GO:0006355
Accr7g00965 355 SMART rav1_2 143 207 IPR001471 GO:0003700|GO:0006355
Accr7g00965 355 MobiDBLite consensus disorder prediction 282 308 - -
Accr7g00965 355 MobiDBLite consensus disorder prediction 282 313 - -
Accr7g00965 355 ProSiteProfiles AP2/ERF domain profile. 143 201 IPR001471 GO:0003700|GO:0006355
Accr7g00965 355 MobiDBLite consensus disorder prediction 1 44 - -
Accr7g00965 355 CDD AP2 142 203 IPR001471 GO:0003700|GO:0006355
Accr7g00965 355 CDD AP2 40 107 IPR001471 GO:0003700|GO:0006355
Accr7g00965 355 SUPERFAMILY DNA-binding domain 142 203 IPR016177 GO:0003677
Accr7g00965 355 SUPERFAMILY DNA-binding domain 40 108 IPR016177 GO:0003677
Accr7g00965 355 MobiDBLite consensus disorder prediction 209 270 - -
Accr7g00965 355 ProSiteProfiles AP2/ERF domain profile. 41 107 IPR001471 GO:0003700|GO:0006355
Accr7g00965 355 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700|GO:0006355
Accr7g00965 355 PRINTS Ethylene responsive element binding protein signature 183 203 IPR001471 GO:0003700|GO:0006355
Accr7g00965 355 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 14 266 - -
Accr7g00965 355 Pfam AP2 domain 142 193 IPR001471 GO:0003700|GO:0006355
Accr7g00965 355 Pfam AP2 domain 40 99 IPR001471 GO:0003700|GO:0006355
Accr7g00965 355 FunFam AP2-like ethylene-responsive transcription factor 40 109 - -
Accr7g00965 355 FunFam AP2-like ethylene-responsive transcription factor 142 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00965 Accr-Chr7 17170882 17174450 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00965 37 205 AP2-EREBP Transcription Factor Family AT5G57390 73.964 4.37e-91 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Accr7g00965 AP2 2.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00965 K09285 - pop:18097139 498.434