Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00957 ATGGTTTTCATAGGGGCATGGTTCATCCTTCTACTTCAATACCAAACTTCAACAAGTCTCACACATCCAAGGCATCATCACTTTTCTCACTCGCTTCTCACAGATAAGGCTGCTCTTCTGGAATTCAAGAAAACAATCATACTTGATCCACATTCCACACTTTCTAACTGGGATGAATCTGTGCATGCGTGCAATTTCACGGGCGTTAAGTGCGATAAGTCTCAGCACCGAGTCACCGAGCTAATCCTCACTGAAACTCGTCTTGTGGGGTTGCTTTCACCCTTCCTTTCCAATCTCACTGGACTGCACATACTTGACATTGTTGACAATCACTTATTTGGCATTATCCCACCAGAACTTTCCTCCCTTAGACGCCTCCATCGACTCCATCTCGAGGGGAACAACTTGCATGGTTCCATACCAGATTCCTTTTCCCAGTTTTCTAAACTTAATGTGCTGCTAATCAAAGATAATAACATAACAGGTTCACTTTCTCCATCTCTTTTCTCCAATTGTTCACTGCAGATTATGGACCTTTCTAGCAACTTCCTCAGTGGTAAGATCCCAGAAGAGATTGGAAACTGTCTGGGTCTACGGAGTCTCAGTCTTTACAACAATCAATTTACTGGACAGATTCCTCTCTCTCTAAATAATTTGTCACTTGTAAATTTAGATGTCGAGTACAATCTATTGTCTGGAGAATTGCCCTCAGAGTTTGTAAGCACATGTCCTGGTGGTCTTCTTTACCTGCATTTGTCATACAATTATATGGTAAGTCATGATCATAATACAAATCTTGATCCATTTTTTGCTGCTCTTAGAAACTGCAGCAGACTACAGGAGCTTGAATTGGCTGGCATGGGCCTCAGGGGAACGTTCTCCGATACCATATGTCAAGTTGGTATCAAACTAAAAAGCCTGCAGCTGCAGGAAAATCAAATATATGGATCAATCCCAGACAGTGTTTCAAATCTTTCCAGCCTTATGATCCTGAATTTGACATCCAATCTTCTCAGTGGAACCATTTCGCCTGAGATCAGCATGTTGTCAAACTTGGAACAACTTTTCTTATCAAACAACCACTTCAAATCAGAAATTCCAGAAGCACTGGGCTATTGTCTAAATCTGGGTCTCTTAGATCTCTCGCACAATGAATTTACTGGAGGGATTCCGGAAAGTCTGGGAAAGTTGGGTCGACTAAATTATTTGTTTCTCAATAATAACCATCTCACAGGAAATGTACCTTCTACATTAGGACAGTGCATTGATCTGTATAGGCTTGACTTGTCCTATAATAGATTAACAGGAACAATCCCACCAGAAATCTCAGGCCTTCATGAAATTAGAATTTTCATAAATCTCTCACATAACCAACTAGAAGGTCCTCTGCCAATTGAGCTCAGCAAACTAGAAAAGGTTCAAGAGATGGATTTTTCATCAAATTACCTAACTGGAAGTATCTTCCCCCAGATAGCAAGCTGCATTGCTGTATCGATGATAAATTTTTCAAACAATTTTCTCCAAGGTGAACTTCCTGAATCCTTAGGTGAACTAAAGAACCTTGAAACTTTCGATGTTTCACGAAACAATTTGTCTGGATTGATCCCCAAAACTCTTAGTAAAATAGATACACTTTCTTTCCTCAATCTATCATACAACAACCTAGATGGAATGGTTCCATCTGGTGGCATCTTTGATTCAGCATCAAATATATCATTCTTAGGAAACCCACATCTTTGTGGAATAATCACAGGCAAAGTTTCATGCTTTCAAAAGCGACATTGGCTCAGAAATCGCCTGTTTTCGCTTATTTTCATCTCGGTCATCTGCATAATCTTGTCAATGATTTGCTGCATAATTGGATGTAAGCGTCTTAAAGTGATTATTTCTGCCCATGGAACTGAGTTTGGTGGAAAACCAGCTAGACGTGAAATGATAAGTAACTTCCCAAGAATCACATACAAGGAACTATCAGAGGCCACTGAAGGATTTGATGATCAGAGACGAGTAGGATCAGGTAGCTATGGATGTGTCTATAGAGGAGTTCTTCCAGATGGAACCCCAATAGCAGTCAAGGTGCTGCATTTGAAGTCTGGAAATTCCACCAAGAGCTTCAATAGAGAATGTCAAGTTTTAAAGAGGATTCGACACAGGAACCTGATAAGGATTGTCACTGCATGTAGTCTGCCTGATTTTAAAGCTCTTGTTCTGCCTTATATGGCCAATGGGAGTTTGGAGAGCCGTCTCTATGCTTCTTTCGGATCTTCTGACCTGAGTATCATCCAGAGGGTGAATATTTGCAGTGACGTAGCTGAAGGGTTGGCCTATCTGCATCATCATTCTCCAGTCAGAGTCATTCATTGTGATCTAAAACCAAGTAATGTTCTTCTTAATGATGACATGACAGCAGTAGTTTCAGATTTTGGGATTGCAAGGTTAATTATGAGTGTTGGAGGAGGAGGAAATACTGGGTTTTATGATAAGATGGGGAGCTCCACTGCAAATTTGTTATGTGGATCTATCGGATACATTGCACCAGAGTACGGATTCGGATCAAATACATCTACAAAAGGAGATGTGTATAGCTTTGGTATTCTTGTCCTTGAGATGGTGACTAGAAAGAGGCCAACAGATGAAATGTTTTCTGGTGGTTTAAGCCTTCACAAATGGGTAAAACTTCATTATCATGGAAGGTTGGAAAAAGTGATAGACTCATGTTTGGTTACAGCTTCAAGAGATCAGTCACAAGAGGTGAAAAGAATGTGGGAAGTTTCCATTGGAGAGTTAATTGAGCTGGGGATCCTTTGCACACAGGAATCACCTTCTGCAAGGCCTAGTATGCTTGATGTAGCAGATGACTTGGATCTTCTCAAGAGATACCTTACTGGGGACACAACTAGAACTTTTGCCTCGTCTCTTGGAATTTCATCTTCTACTACAGATTATTTTTAA 2952 0.4051 MVFIGAWFILLLQYQTSTSLTHPRHHHFSHSLLTDKAALLEFKKTIILDPHSTLSNWDESVHACNFTGVKCDKSQHRVTELILTETRLVGLLSPFLSNLTGLHILDIVDNHLFGIIPPELSSLRRLHRLHLEGNNLHGSIPDSFSQFSKLNVLLIKDNNITGSLSPSLFSNCSLQIMDLSSNFLSGKIPEEIGNCLGLRSLSLYNNQFTGQIPLSLNNLSLVNLDVEYNLLSGELPSEFVSTCPGGLLYLHLSYNYMVSHDHNTNLDPFFAALRNCSRLQELELAGMGLRGTFSDTICQVGIKLKSLQLQENQIYGSIPDSVSNLSSLMILNLTSNLLSGTISPEISMLSNLEQLFLSNNHFKSEIPEALGYCLNLGLLDLSHNEFTGGIPESLGKLGRLNYLFLNNNHLTGNVPSTLGQCIDLYRLDLSYNRLTGTIPPEISGLHEIRIFINLSHNQLEGPLPIELSKLEKVQEMDFSSNYLTGSIFPQIASCIAVSMINFSNNFLQGELPESLGELKNLETFDVSRNNLSGLIPKTLSKIDTLSFLNLSYNNLDGMVPSGGIFDSASNISFLGNPHLCGIITGKVSCFQKRHWLRNRLFSLIFISVICIILSMICCIIGCKRLKVIISAHGTEFGGKPARREMISNFPRITYKELSEATEGFDDQRRVGSGSYGCVYRGVLPDGTPIAVKVLHLKSGNSTKSFNRECQVLKRIRHRNLIRIVTACSLPDFKALVLPYMANGSLESRLYASFGSSDLSIIQRVNICSDVAEGLAYLHHHSPVRVIHCDLKPSNVLLNDDMTAVVSDFGIARLIMSVGGGGNTGFYDKMGSSTANLLCGSIGYIAPEYGFGSNTSTKGDVYSFGILVLEMVTRKRPTDEMFSGGLSLHKWVKLHYHGRLEKVIDSCLVTASRDQSQEVKRMWEVSIGELIELGILCTQESPSARPSMLDVADDLDLLKRYLTGDTTRTFASSLGISSSTTDYF 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00957 983 FunFam LRR receptor-like serine/threonine-protein kinase EFR 303 594 - -
Accr7g00957 983 CDD STKc_IRAK 670 947 - -
Accr7g00957 983 Pfam Leucine Rich Repeat 520 541 IPR001611 GO:0005515
Accr7g00957 983 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 740 967 - -
Accr7g00957 983 Pfam Protein kinase domain 665 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00957 983 SUPERFAMILY L domain-like 32 259 - -
Accr7g00957 983 SMART serkin_6 664 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00957 983 Pfam Leucine rich repeat 124 182 IPR001611 GO:0005515
Accr7g00957 983 Pfam Leucine rich repeat 303 362 IPR001611 GO:0005515
Accr7g00957 983 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 644 739 - -
Accr7g00957 983 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 374 954 - -
Accr7g00957 983 Gene3D Phosphorylase Kinase; domain 1 644 739 - -
Accr7g00957 983 SMART LRR_typ_2 518 541 IPR003591 -
Accr7g00957 983 SMART LRR_typ_2 123 146 IPR003591 -
Accr7g00957 983 SMART LRR_typ_2 397 421 IPR003591 -
Accr7g00957 983 SMART LRR_typ_2 349 373 IPR003591 -
Accr7g00957 983 ProSitePatterns Protein kinases ATP-binding region signature. 670 692 IPR017441 GO:0005524
Accr7g00957 983 SUPERFAMILY L domain-like 328 581 - -
Accr7g00957 983 ProSitePatterns Serine/Threonine protein kinases active-site signature. 785 797 IPR008271 GO:0004672|GO:0006468
Accr7g00957 983 SUPERFAMILY Protein kinase-like (PK-like) 644 954 IPR011009 -
Accr7g00957 983 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Accr7g00957 983 Gene3D Ribonuclease Inhibitor 34 146 IPR032675 -
Accr7g00957 983 Gene3D Ribonuclease Inhibitor 147 221 IPR032675 -
Accr7g00957 983 Gene3D Transferase(Phosphotransferase) domain 1 740 969 - -
Accr7g00957 983 ProSiteProfiles Protein kinase domain profile. 664 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00957 983 Gene3D Ribonuclease Inhibitor 222 595 IPR032675 -
Accr7g00957 983 FunFam Leucine-rich repeat receptor-like protein kinase 33 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00957 Accr-Chr7 17061515 17064945 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00957 26 966 Receptor kinase-like Gene Family AT3G47570 34.182 7.04e-156 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Accr7g00957 Pkinase 8.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00957 - - pcin:129291644 1628.22