Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00949 ATGCCTTCCAGATCCTTACCTTCTAGTCCCAACCCTCCAAGTCCAAGTTTTTTCATTAAAACCAGAGTCATCTTCCTCGCACTCACAATCTCAGCTTCTGTTGTAATTGTATGCTCGATCATTTACTTTCTTTACCACTTATGGCATTCTATAGTAGACAGAGCTAAAACCATCCCCTTTGATTCGAGTGCTCCTTTGAAGCTTGAAAGATTCTCTTACAAAGAATTGAAGCAAGCCACAAATGGGTTTGACGCAGCCAATGTAATTGGTAAAGGAGGGTCAGGAACTGTGTTCAGAGGAACACTTAAAGATGGGAAATTGATTGCAGTTAAGAGGCTAGACGGTTTGTCTTTGCAAACAGAGAGAGAGTTTCAGAATGAGCTCCAGATTCTAGGTGGGTTAAGATCTCCTTTTATTGTGATCCTTTTGGGGTATTGTGTGGAAAAGAACAAGAGAGTTTTGGTTTATGATTACATGCCCAATAGAAGCTTACAGGAGTCCCTATTTGGTGGAGGAGATGATGATGGGTCTTTGTGTTTGAGCTGGGAGAGAAGGTTCCACATCATTCTAGATGTTTCTAGAGCCCTGGAATTCTTACACCTTGGTTGTGATCCTCCAGTGATTCATGGTGATGTTAAGCCAAGCAATGTTCTTCTTGATTCAGAGTTCAGAGGGAAGATTTCAGACTTTGGATTGTCAAGGATCAAAGTGGAGAATGAGTTTGGTGTAGATTTGTTTAGCCAAGACTTGGGGAGGAGTCAAGAACTATGGAAAAGTCAAGAGATTTCAGGTAATTTAACTGCCGAAACTCCAACTCCAGCTATTGGTACACCAGTTGAGAGTGTTAATAATGAAGTAGATTTTGCTTTAGCTTTGCAAGCATCTTCTTCGTCTAAAAATAGCAAGACATGTTTTAATGTTAAGGCTTTGAGCTTGAGTTCTTTCAATTATAATGCCAATATTGCCAATGAGAGTGAAATCAGAAGTTGTAGTAATAATAATGCAAAGGGAAAGGAAATATCAACTCTAGATCTAATTGGTGGGGATGATTGGAATCATAAATTTGTTCCTTATGATGATGAGTTCTCTAGCATTGATCATAGTAAGGAATTAAGTCCTGTGAATGCTTCTTCTGTGGATGGAGAGAAAATTAACGGGAAACAATGGGGAAAGGATTGGTGGTGGAGACAAGATGGGACCGATGAATTATGTAGTAGAGACTATGTGATGGAGTGGATTGGGAGTCAAATTTGTCCTTCGAACCCAGATTGGGTTGAAGCAAAGAAGAACACCAATGAAAAACTGGAGTTGGAAACTTCCAGTCCAGTGGATCAAAAAGCTGATGATGAGGCAAATGGGCAACAATTACAAGCATTTGCAGTGGGAGTAGATACAGAGAATGTGGTTGAGGAGAAAGAAGCGAGAGGAAAGAAGAAAAACCGGAAGAAAAAACCGAGGAAGATGCAAGAATGGTGGAAAGAAGAACACCTAGCCGAATTAAGCAAGAAGAACAGTAAGCTGAAGAATCTTCAAACCAGGTGGAAGAAAGGCTTCAAGGTGCCACATTTTGACTTGGGGAGAAGGCTTTATCTTTGCAGGCGAATGAGAAGGAACTTCACCAAAGAAGAAGCTCAGGACGAGAGCGATCATCAAAATGGTGAGTTCAGTTTCAGGAGAGGTTGGAGGAAGAAAAGTACTCGTTCGATCGGTAGTGACATGTGGAGTGGAGATCTTTTCAGCCGCGAGCTGAGCAGCACAACAAGCATGAGAGGAACATTATGTTATGTTGCACCAGAATATGGAGGGTGTGGGTACTTAATGGAGAAAGCTGATATTTACAGTTTAGGAGTTTTGATCCTTGTGATTGTGTCAGGAAGAAGACCATTACATGTTCTTGCATCTCCAATGAAGCTAGAGAAAGCAAACTTAATAAGCTGGTGCAGGCACTTGGCTCATTCTGGTAACATTTTAGAGCTAGTAGATGAGAGACTTGTGAAAGATTATTACAACAAGGAGCAAGCAAGCTTGTGTATCAACTTGGCACTTGCTTGCTTACAGAAGATTCCGGAACTGAGGCCGGATATCGGGGACGTTGTCAAGATTTTGAAGGGCGAGATGGACCTTCCACCGCTGCCATTCGAGTTTTCACCATCTCCTCCTTCCAAGTTTTACGGCAAATTAAGGACTAAACAGCAGAAGAGCACTACAGAATAA 2214 0.4146 MPSRSLPSSPNPPSPSFFIKTRVIFLALTISASVVIVCSIIYFLYHLWHSIVDRAKTIPFDSSAPLKLERFSYKELKQATNGFDAANVIGKGGSGTVFRGTLKDGKLIAVKRLDGLSLQTEREFQNELQILGGLRSPFIVILLGYCVEKNKRVLVYDYMPNRSLQESLFGGGDDDGSLCLSWERRFHIILDVSRALEFLHLGCDPPVIHGDVKPSNVLLDSEFRGKISDFGLSRIKVENEFGVDLFSQDLGRSQELWKSQEISGNLTAETPTPAIGTPVESVNNEVDFALALQASSSSKNSKTCFNVKALSLSSFNYNANIANESEIRSCSNNNAKGKEISTLDLIGGDDWNHKFVPYDDEFSSIDHSKELSPVNASSVDGEKINGKQWGKDWWWRQDGTDELCSRDYVMEWIGSQICPSNPDWVEAKKNTNEKLELETSSPVDQKADDEANGQQLQAFAVGVDTENVVEEKEARGKKKNRKKKPRKMQEWWKEEHLAELSKKNSKLKNLQTRWKKGFKVPHFDLGRRLYLCRRMRRNFTKEEAQDESDHQNGEFSFRRGWRKKSTRSIGSDMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHLAHSGNILELVDERLVKDYYNKEQASLCINLALACLQKIPELRPDIGDVVKILKGEMDLPPLPFEFSPSPPSKFYGKLRTKQQKSTTE 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00949 737 FunFam Receptor-like serine/threonine-protein kinase At4g25390 558 708 - -
Accr7g00949 737 Pfam Protein kinase domain 86 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00949 737 SUPERFAMILY Protein kinase-like (PK-like) 63 721 IPR011009 -
Accr7g00949 737 Coils Coil 493 513 - -
Accr7g00949 737 FunFam Receptor-like serine/threonine-protein kinase At4g25390 52 158 - -
Accr7g00949 737 MobiDBLite consensus disorder prediction 714 737 - -
Accr7g00949 737 ProSitePatterns Protein kinases ATP-binding region signature. 89 111 IPR017441 GO:0005524
Accr7g00949 737 FunFam putative receptor-like protein kinase At1g80870 159 273 - -
Accr7g00949 737 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Accr7g00949 737 PANTHER OS07G0586332 PROTEIN 1 731 IPR044576 -
Accr7g00949 737 ProSiteProfiles Protein kinase domain profile. 83 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00949 737 Gene3D Transferase(Phosphotransferase) domain 1 561 708 - -
Accr7g00949 737 Gene3D Transferase(Phosphotransferase) domain 1 159 274 - -
Accr7g00949 737 SMART serkin_6 83 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00949 737 Gene3D Phosphorylase Kinase; domain 1 59 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00949 Accr-Chr7 16889636 16891849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00949 569 702 Receptor kinase-like Gene Family AT3G58690 33.333 1.42e-12 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Accr7g00949 Pkinase 1.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00949 - - gmx:100800845 1075.46