Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00927 ATGGCCAGAGTCAACGAACAAGCCCCGAATCAGAGCCAGAATGACTCGCCCAGGAGCATTCTGTTCAACAAGTACGAGATGGGGAGGCAATTAGGTCAGGGAAATTTCGCCAAGGTCTATTACGCCAGGAATCTTGTGACGAACGAGAGCGTCGCGATTAAGGTGATCAAGAAAGAGAAGCTGAAGAAAGAGAGGCTGGTGAGGCAGATCAAGCAAGAGGTCTCTGTCATGCGATTGGTCCGGCATCCTCACATCGTCGAGCTCAAAGAAGTTATGGCCACCAAGGGAAAGATCTTTTTGGTTATGGAATATGTCAAAGGTGGAGAGTTATTCTCCAAGGTCGCTAAAGGCAAGCTCAAAGAAGATGTCGCCAGAAAATATTTCCAGCAATTGATTAGCGCTATTGATTTCTGTCACAGCCGTGGGGTTACTCATCGTGATCTGAAGCCTGAGAACCTTCTTTTGGACGAGAACGAAGATCTTAAGGTTTCCGATTTCGGGTTGTCGACGTTGCCGGAGCAGCGTCGAGCGGACGGAATGCTGCTCACGCCGTGTGGAACGCCGGCTTATGTGGCGCCAGAGGTTCTGAAGAAGAAAGGGTATGATGGATCTAAAGCTGATCTTTGGTCATGTGGCGTGATTCTCTATGCTCTGCTTTCTGGGTATCTGCCATTTCAGGGTGAGAATATTATGAAGATTTACAAGAAAGCATTCAAAGCTGAGTATGAATTCCCAGATTGGATTTCACCCGAAGCTAAGAATTTGATCTCTAATCTTCTACTCGCCGACCCAGAAAAGAGATACTCGATCCCAGATATCATGAAGGACCCCTGGTTTCAGATCGGATTCATGAGACCAATTGCGTTTTCGATTAATAAGGAACCGGGTTTTGATTTCGATGAGGAGGAGAACGAAGTTAAAGAGAAAGAAGAAGGAGAAGTGTTGGTAAGATCAGAGAAACCATCTCGACCATTTTACAATGCGTTTGAGATAATCTCATCATTGTCAAATGGGTTTGATCTGAGGAGCTTGTTCGAGACACGAAAGAGGTCTCCGTCGACATTCCTGTCGAAGCTTTCGGCTCCGGTAGTCGTCGGGAAACTTGAGTCGGTGGCGAAGAAGCTGAATTTTAAGATCACAGGGAGGAAGGATTTCAAGCTGAGGATGCAGGGGGAAACAGAGGGAAGAAAGGGGAAGCTGGCCATGACGGTGGAGGTGTTTGAGATGGCGCCGGAGGTGGCGGTGGTGGAATTCTCGAAGTCGGCCGGCGATACGCTCGAGTACATAAAGTTCTGTGAGGACGAAGTGAGGCCTGCACTGAAAGACATAGTCTGGAGCTGGCAGGGGGATAGCACTAATAATCATAATAATTGTAATCAAAATTAA 1386 0.4733 MARVNEQAPNQSQNDSPRSILFNKYEMGRQLGQGNFAKVYYARNLVTNESVAIKVIKKEKLKKERLVRQIKQEVSVMRLVRHPHIVELKEVMATKGKIFLVMEYVKGGELFSKVAKGKLKEDVARKYFQQLISAIDFCHSRGVTHRDLKPENLLLDENEDLKVSDFGLSTLPEQRRADGMLLTPCGTPAYVAPEVLKKKGYDGSKADLWSCGVILYALLSGYLPFQGENIMKIYKKAFKAEYEFPDWISPEAKNLISNLLLADPEKRYSIPDIMKDPWFQIGFMRPIAFSINKEPGFDFDEEENEVKEKEEGEVLVRSEKPSRPFYNAFEIISSLSNGFDLRSLFETRKRSPSTFLSKLSAPVVVGKLESVAKKLNFKITGRKDFKLRMQGETEGRKGKLAMTVEVFEMAPEVAVVEFSKSAGDTLEYIKFCEDEVRPALKDIVWSWQGDSTNNHNNCNQN 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00927 461 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 12 441 - -
Accr7g00927 461 SUPERFAMILY Protein kinase-like (PK-like) 21 280 IPR011009 -
Accr7g00927 461 SMART serkin_6 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00927 461 ProSiteProfiles NAF domain profile. 321 346 IPR018451 GO:0007165
Accr7g00927 461 FunFam Non-specific serine/threonine protein kinase 321 445 - -
Accr7g00927 461 CDD CIPK_C 327 441 - -
Accr7g00927 461 Pfam NAF domain 325 380 IPR004041 GO:0007165
Accr7g00927 461 Pfam Protein kinase domain 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00927 461 FunFam Non-specific serine/threonine protein kinase 17 104 - -
Accr7g00927 461 Coils Coil 53 73 - -
Accr7g00927 461 Gene3D Transferase(Phosphotransferase) domain 1 18 325 - -
Accr7g00927 461 ProSiteProfiles Protein kinase domain profile. 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00927 461 FunFam Non-specific serine/threonine protein kinase 18 321 - -
Accr7g00927 461 Gene3D Kinase associated domain 1, KA1 326 446 - -
Accr7g00927 461 ProSitePatterns Protein kinases ATP-binding region signature. 31 58 IPR017441 GO:0005524
Accr7g00927 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00927 Accr-Chr7 15656806 15658191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00927 6 457 CBL-interacting serine-threonine protein kinases AT5G25110 61.504 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Accr7g00927 Pkinase 1e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00927 - - gmx:100812424 700.664