Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00919 ATGGACCTTCTAAGATCAGAGCCATGTTCGTCTGAAAAACCCTCAATGGATTGCCAAACTGAGAAGAGAGACACACAAAAAGATGATCAAACACAACAACACCCACATGACTCAGCTCCTCTTCTTCTGAATCTAAACCTCTCTAATGAGGATTCAGTGGATGGATCAAAGCCAGAACTCAACCTCATCAATTGTTTTGATTCCAAGTCATCCTTAAACTCCTCAGAATCTTCTCATGACTTGGAACCTCGGATTTTCTCATGCAACTACTGTCAGAGAAAGTTTTATAGCTCGCAGGCTCTTGGAGGTCACCAGAATGCACACAAGCGCGAGAGGACTTTGGCGAAAAGAGGACATAAAGTTGGAGCTGCAATTTCAGTAGAATTTGGACAAAGGTACACTAGCATGGCTTCTTTGCCTTTGCATGGCTCATATAACAGATCACTTGGGATTCAAGCACATTCTATGATTCACAAGCCCTCTTATCAAGCTCCAAGTACTCTTGGTTTACCGCGATTCCATGCTCAAAATGCCTGGTGGAGGAAGCCTTTAGATTCACAGCCTACAATTGGGAAGCTTCCTTCTGGAAAAGTTCATATTGGAGATGAAACTGCTTCCTTTTCTGGTGGAGTTTCAAGGTCAGCGAAGTTTTCTCCAAATATGGTGGTCAAAGAAGGAACTGGAGCTTATTGGTTGGGAAGTGTTACTCATGTAAAATCTAAACAAGAAGAGTTGCAGAAGCTTGACTTGTCCCTCAAACTCTAA 765 0.4261 MDLLRSEPCSSEKPSMDCQTEKRDTQKDDQTQQHPHDSAPLLLNLNLSNEDSVDGSKPELNLINCFDSKSSLNSSESSHDLEPRIFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGHKVGAAISVEFGQRYTSMASLPLHGSYNRSLGIQAHSMIHKPSYQAPSTLGLPRFHAQNAWWRKPLDSQPTIGKLPSGKVHIGDETASFSGGVSRSAKFSPNMVVKEGTGAYWLGSVTHVKSKQEELQKLDLSLKL 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00919 254 Gene3D Classic Zinc Finger 64 133 - -
Accr7g00919 254 FunFam Zinc finger protein 2 64 132 - -
Accr7g00919 254 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 1 254 IPR044246 GO:0009788
Accr7g00919 254 MobiDBLite consensus disorder prediction 16 34 - -
Accr7g00919 254 ProSitePatterns Zinc finger C2H2 type domain signature. 88 108 IPR013087 -
Accr7g00919 254 ProSiteProfiles Zinc finger C2H2 type domain profile. 86 113 IPR013087 -
Accr7g00919 254 SUPERFAMILY beta-beta-alpha zinc fingers 83 113 IPR036236 -
Accr7g00919 254 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00919 Accr-Chr7 15475932 15476696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00919 40 254 C2H2 Transcription Factor Family AT5G25160 46.753 3.95e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr7g00919 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00919 - - qsa:O6P43_017957 264.618