Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00904 ATGGATCAGCTTTCTTGGGATGCGTGGCTCTCTGAGTTGGAAACGGAAAACGAATCTGTTTTTTTAAGAGGAACAAACTGGGAGCAGAATGAAGAAGAAGCTGGAGAGTGTTTTCTCAGAGATATCTTACAGGACCCAACTAATTTATCTTCTGAGAATGAGGCCATTTTTGCTCCAGCCACCGTGGCAGGCGGTGGCGCTACCACCAACTCCGTCGTGAACTCTCTGCAGTGTGATTCTCAAACAACACCACTAAATGCCTGCGTTCTGTCTTTCGATAAATCTGTTGTCATACCAGACATCGCAGATCCTAGCAGTTATTCTTCGAAGCTCAAACGGCGCTTTGAAGCAGTTAACGATGAACCGCCGACAGTGGACGCCGTCAGAGGAACAAAGAAGACTAGAAGGGGTGCTGATGCGACGGATCACATAATGGCTGAGAGAAGAAGGAGACAGGAACTCACAGAAAGGTTCATAGCTCTCTCAGCCACCATCCCTGGCTTGAAAAAGATTGATAAGGCGACTATACTGAGCGAAGCTATAAGCTATGTGAAGCAGCTTCAAGAGCGTGTGAAGGAGCTTGAGCAAGATACGAAGAACAAGATGATAATAATGGAGAAGCCCTATCATCAAGCGGTGCTGTGTTCTGGAAATGATGATGATGATAATGTTGACGGTGGCACGCCACCGGCGATGAGTGAAGTGAACTACTTCGACGGCAACAGCAACAACCATGTTGTGCTGCCTGAGGTGAAAGCAAGAATCTCTGACAACAAACAAGTGCTGATAAGAATCCTGTGCAAGAAACAGAAATCCACCATGCTTACAATCCTTGATAAGCTCGAAAGCCTTCGTCTCATAGTGTCTGGTAATAGTGTCATACCCTTCGGCTCCTCTACTCTTGATGTCACCATCGTTGCGCAGATGAGTGAGGAATACAGAATATCGGTGGAGGATATAGTGAAAAGCCTGAGGATGACTCTAAAGTGTAATGGAGATCCCTGCTAG 1008 0.4643 MDQLSWDAWLSELETENESVFLRGTNWEQNEEEAGECFLRDILQDPTNLSSENEAIFAPATVAGGGATTNSVVNSLQCDSQTTPLNACVLSFDKSVVIPDIADPSSYSSKLKRRFEAVNDEPPTVDAVRGTKKTRRGADATDHIMAERRRRQELTERFIALSATIPGLKKIDKATILSEAISYVKQLQERVKELEQDTKNKMIIMEKPYHQAVLCSGNDDDDNVDGGTPPAMSEVNYFDGNSNNHVVLPEVKARISDNKQVLIRILCKKQKSTMLTILDKLESLRLIVSGNSVIPFGSSTLDVTIVAQMSEEYRISVEDIVKSLRMTLKCNGDPC 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00904 335 Coils Coil 177 204 - -
Accr7g00904 335 Pfam Helix-loop-helix DNA-binding domain 142 188 IPR011598 GO:0046983
Accr7g00904 335 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 138 187 IPR011598 GO:0046983
Accr7g00904 335 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 143 205 IPR036638 GO:0046983
Accr7g00904 335 PANTHER BHLH TRANSCRIPTION FACTOR 75 328 - -
Accr7g00904 335 Gene3D - 127 202 IPR036638 GO:0046983
Accr7g00904 335 SMART finulus 144 193 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00904 Accr-Chr7 14979427 14981186 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00904 129 328 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 40.865 1.21e-41 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr7g00904 HLH 3.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00904 - - vun:114166804 202.601