Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00900 ATGGATCAGCTTTCTTGGGATGCGTGGCTCTCTGAACTGGAAATGGAAAACGAATCTGTTTCTTTAAGAGGAACAAACTGGGAGCAGAATGAAGAAGAAGTTGGAGAGTGTTTTCTCAGAGATATCTTACAGGACCCAACTAATTTATCTTCTGAGACTGAGGCCATTTTTGCTCCAGCCACCGAGGCAGGCGGTGGCGTTACCACCAACTCCGTTGTGAACTCTCTGCAGTGTGATTCTCAAACAACACCGCTAAATGCCTGCGTTCTGTCTTTCGATAAATCCGTTGTCATACCAGACATCGCAGATCCTACCAGTTATTCTTCGAAGCTTAAACGGCGCTTTGAAGCAGTTAAAGATGAACCGCCGCCGGTGGACGCCGTCAGAGGAACAAAGAAGACTAGAAGCGGCGCTGATGCGACGGATCACATAATGGCTGAGAGAAGAAGGAGACAGGAACTCACAGAAAGGTTCATAGCTCTCTCAGCCACCATCCCTGGCTTGAAAAAGATTGATAAGGCGACTATACTGAGCGAAGCTATAAGCTATGTGAAGCAGCTTCAAAAGCGTGTAAAGGAGCTAGAGCAAGATACGAAGAACAAGATGATAATAATGGAGAAGCCTTATCATCAAGCGGTGCTGTGTTCTGGAGATGATGATGATGATGATAATGTTGACCGAGGCACGCCGCCGGTGATGAGTGAAGTGAACTACTTCCACGGCAACGGCAACAACGATGTTGTGCTGCCTGAGGTGAAAGCAAGAATCTCTGACAACAAGCAAGTGCTGATAAGAATCCTGTGCAAGAAACGGAAATCCACCATGCTTACAATCCTTGATAAGCTCAAAAGCCTTCATCTCATTGTGTCTGGTAATAGTGTCATGCCCTTCGGCTCCTCTACTCTTGATATCACCATCGTTGCGCAGATGAGTGAGGAATACGGTGTATCGGTGGAGGATATAGTGAAAAGCCTGAGGATGACTCTAAAGTGTAATGGGGATCCCTGCTAG 1011 0.4669 MDQLSWDAWLSELEMENESVSLRGTNWEQNEEEVGECFLRDILQDPTNLSSETEAIFAPATEAGGGVTTNSVVNSLQCDSQTTPLNACVLSFDKSVVIPDIADPTSYSSKLKRRFEAVKDEPPPVDAVRGTKKTRSGADATDHIMAERRRRQELTERFIALSATIPGLKKIDKATILSEAISYVKQLQKRVKELEQDTKNKMIIMEKPYHQAVLCSGDDDDDDNVDRGTPPVMSEVNYFHGNGNNDVVLPEVKARISDNKQVLIRILCKKRKSTMLTILDKLKSLHLIVSGNSVMPFGSSTLDITIVAQMSEEYGVSVEDIVKSLRMTLKCNGDPC 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00900 336 Coils Coil 177 204 - -
Accr7g00900 336 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 138 187 IPR011598 GO:0046983
Accr7g00900 336 Gene3D - 130 202 IPR036638 GO:0046983
Accr7g00900 336 MobiDBLite consensus disorder prediction 121 141 - -
Accr7g00900 336 Pfam Helix-loop-helix DNA-binding domain 142 188 IPR011598 GO:0046983
Accr7g00900 336 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 143 206 IPR036638 GO:0046983
Accr7g00900 336 PANTHER BHLH TRANSCRIPTION FACTOR 77 329 - -
Accr7g00900 336 SMART finulus 144 193 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00900 Accr-Chr7 14671475 14673324 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00900 129 329 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 39.234 4.69e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr7g00900 HLH 3.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00900 - - lang:109357653 200.675