Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00891 ATGGATGCCAATTGGAGACCCACACGAGGTATTGAATCCACTATGGATACAAATACAAGTGATTGGAGAACTCAACTGCAACCTGATTCACGTGAAAGAATTATCAACAAAATAATGGATGCACTACAGAGACATATTCCTGTTTCTGGTCAAGATGGTTTGCATGAATTGTGCAAAATTGCTCAAAGGTTTGAAGATAAGATTTATACTGCTGCAACAAGCCAGTCTGATTATCTTCGGAAAATATCTTTGAAGATACTTGCAATGGATAATAAAACCCAGAATACCATGGTCAACCCTTCACAATCAAATGCAGGTGGCCCTAGCAACAAGCGTATTGATTCAGGAATTCCTATGCATTGTCAAGTTCACAATCCAGGGCAGCTACATGCTACTCCAGTGCGTAATCAGAATCAGCAAGCTAATAATGTTCAACAGCCAACGCAACCTATGCTGCAGCAAGAGTCCCAATCTGTTATCAGGCAACAACAACAACAACAAAATACATCAATTAATAACCAGCAACAAATCCCAATTTCTCAACAGCCAATATTGGCTCCACAGCAGCAGCAGCACCTTCTAGCGCTACAGTCAAATGTAACAAGCGTCCGACACCCTCAGCTAGTTGGGCAACAGAATGAGGGTGATTTGCAGCAACATCTGAGATTGCTTGTTGGGCAGCAGAATAATCTTCCAATCCTGCAGCAGCCCCAGCAACAGCAGCAGCAGTTGATAAATCAGCAGAACAATCTCGCCAACATGCATGAGCAACAGTTGGGAAGTAACATCCCAGGGTTACAACTACAACAGAAGCTTGCAACTCAGCCTGGCAACTCAAGCTTGCAGACTAACCCCTTCCAACCAGATATGCAGCAAAGACTTCAGGCTTCGAGTTCTTTTCTTCAACAGCAAAATGTACTACTTGATCAACAAAAGCAATTATATCAGTCACAACGAGCTCTTCCAAACTCATCATCAACTTCTCTAGATTCAACAACACAGACCAGAAGACCTGAAGAGGATGATTGGAAAGAAGAGTTGTACCAAAAGATCAAGTCCATGAAAGAATCATACTTGCCAGAATTGTCTGAAATGCACCAGAAAATTGAAGCTAAACTTCAGCAGCATGAAGCCCTTCCAGATGGACCCAGGTCAGATCAACTTGAAAAGCTGAAGATATTCAAAACAATGTTGGAGCGCCTCATGACATTTCTACAGATTTCCAAGGGCCATATTGTGCCTGCTTTCAAGGAAAAAATGGCTTCATATGAGAAGCAGATCTTAAACTTTATAGAAACAAATAGGCCCAGGAAAGCTATGTCTTCTATGCAGCGAGGGCAACTTCCTCCACCTCATATGCACCCAGTACCACAGTCACAATCCCAACTTACTCAAGTTCAATCTCATGAAAATCAAATGAACTCTCAGATGCAATCAACAAACTTTGAGAGTTTTGTGAATTTCCTGCAGCAGGTTGGGGCGAGCTCCCTTCAACAAAACTCTCTGAATGCTCCTCAACAGCAAAATGTACTTGATCAACAACAGCAATCATATCAGTCGCAAAGAACTCTTCCTGTTTCATCATCATCTTCTCTAGGTTCAACTGCATTGACTGGAAAATCTGGTGGGGACGATTGGCAAGAAGCGGCTTACCAAAAGAAAAAGAATTTGAGGAAGTCTCCTGAACCCCCCGAAGAGCCAGTTTTCAACTGCCCAATATGTATGGAACCTTTGGTAGAAGAAATGTCGACAAGGTGTGGTCATATTTTTTGCAAGAGATGCATTAAGGCTGCAATAAATGCACAGGGTAAATGCCCTACCTGTAGGAAAAAGGTTAATGTGAAAGAGCTCATAAGGGTTTTTCTCCCATCAGCTAGTTGA 1881 0.4221 MDANWRPTRGIESTMDTNTSDWRTQLQPDSRERIINKIMDALQRHIPVSGQDGLHELCKIAQRFEDKIYTAATSQSDYLRKISLKILAMDNKTQNTMVNPSQSNAGGPSNKRIDSGIPMHCQVHNPGQLHATPVRNQNQQANNVQQPTQPMLQQESQSVIRQQQQQQNTSINNQQQIPISQQPILAPQQQQHLLALQSNVTSVRHPQLVGQQNEGDLQQHLRLLVGQQNNLPILQQPQQQQQQLINQQNNLANMHEQQLGSNIPGLQLQQKLATQPGNSSLQTNPFQPDMQQRLQASSSFLQQQNVLLDQQKQLYQSQRALPNSSSTSLDSTTQTRRPEEDDWKEELYQKIKSMKESYLPELSEMHQKIEAKLQQHEALPDGPRSDQLEKLKIFKTMLERLMTFLQISKGHIVPAFKEKMASYEKQILNFIETNRPRKAMSSMQRGQLPPPHMHPVPQSQSQLTQVQSHENQMNSQMQSTNFESFVNFLQQVGASSLQQNSLNAPQQQNVLDQQQQSYQSQRTLPVSSSSSLGSTALTGKSGGDDWQEAAYQKKKNLRKSPEPPEEPVFNCPICMEPLVEEMSTRCGHIFCKRCIKAAINAQGKCPTCRKKVNVKELIRVFLPSAS 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00891 626 SUPERFAMILY RING/U-box 570 615 - -
Accr7g00891 626 Coils Coil 359 379 - -
Accr7g00891 626 ProSitePatterns Zinc finger RING-type signature. 586 595 IPR017907 -
Accr7g00891 626 MobiDBLite consensus disorder prediction 499 545 - -
Accr7g00891 626 SMART ring_2 571 608 IPR001841 -
Accr7g00891 626 MobiDBLite consensus disorder prediction 437 476 - -
Accr7g00891 626 MobiDBLite consensus disorder prediction 140 173 - -
Accr7g00891 626 Pfam Zinc finger, C3HC4 type (RING finger) 570 608 - -
Accr7g00891 626 Gene3D Coactivator CBP, KIX domain 21 99 IPR036529 GO:0003712|GO:0006355
Accr7g00891 626 ProSiteProfiles Zinc finger RING-type profile. 571 609 IPR001841 -
Accr7g00891 626 MobiDBLite consensus disorder prediction 1 21 - -
Accr7g00891 626 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 534 625 IPR013083 -
Accr7g00891 626 MobiDBLite consensus disorder prediction 317 343 - -
Accr7g00891 626 SUPERFAMILY Kix domain of CBP (creb binding protein) 19 95 IPR036529 GO:0003712|GO:0006355
Accr7g00891 626 MobiDBLite consensus disorder prediction 317 333 - -
Accr7g00891 626 MobiDBLite consensus disorder prediction 457 476 - -
Accr7g00891 626 FunFam Mediator of RNA polymerase II transcription subunit 15a 21 99 - -
Accr7g00891 626 Pfam KIX domain 20 98 IPR036546 -
Accr7g00891 626 MobiDBLite consensus disorder prediction 499 541 - -
Accr7g00891 626 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 443 555 IPR044661 GO:0003713|GO:0031490
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00891 Accr-Chr7 14409191 14423573 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00891 559 624 C3H Transcription Factor Family AT3G07200 65.672 2.82e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00891 K14972 - msyl:126615400 393.275