Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00860 ATGGCCGTTATTTCTTTCTCTTTTCAACCTTATCTGCATCCATCCTCCGCTCCTTCGTCGTCGCCGTCCTCCTCCTCTTTTTTATGCGATAGTGTCCACCTTAGGACCCATAAGAACTGCATCTCTATCCATTCACCTTGCCATTTTCCTTCTTTGACATTAACTAATAAGTCCTCCACGAGGAGCTTCCGAACTGCGATTGCTGCCTATGGCGACTATTATGCGACTCTTGGAGTTTCCACATCCGCGACTAACAAGGAGATTAAGGGGGCTTATCGAAATTTAGCTCGTCAGTACCATCCTGATGTGAACAAGGAACCTGGAGCTATTGACAAGTTCAAGGAAATTAGTGCTGCATATGAGGTGCTATCAGATGATAAGAAGAGGGCCTTGTATGATCAACATGGAGAGGCTGGCGTTAAGAGTGCTGTAGTAGGATCAAATGCTTATACGACTAACCCATATGATTTGTTTGAGACATTTTACGGGCCAAGTATGGGTGGCTTTGCTGGCATGGATCCAACTGGATTTGGAGCACGCCGCCGCAGTACCATTATTAAGGGTGGAGACATTCGGGGAAGGAAGATAAGAGAAGAGAAACGAAGGCTGAGGAGGAAGAGGGACTGA 627 0.4641 MAVISFSFQPYLHPSSAPSSSPSSSSFLCDSVHLRTHKNCISIHSPCHFPSLTLTNKSSTRSFRTAIAAYGDYYATLGVSTSATNKEIKGAYRNLARQYHPDVNKEPGAIDKFKEISAAYEVLSDDKKRALYDQHGEAGVKSAVVGSNAYTTNPYDLFETFYGPSMGGFAGMDPTGFGARRRSTIIKGGDIRGRKIREEKRRLRRKRD 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00860 208 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 23 190 - -
Accr7g00860 208 ProSiteProfiles dnaJ domain profile. 72 136 IPR001623 -
Accr7g00860 208 SUPERFAMILY Chaperone J-domain 69 177 IPR036869 -
Accr7g00860 208 FunFam Chaperone protein dnaJ A6 chloroplastic 69 174 - -
Accr7g00860 208 SMART dnaj_3 71 128 IPR001623 -
Accr7g00860 208 CDD DnaJ 72 125 IPR001623 -
Accr7g00860 208 ProSitePatterns Nt-dnaJ domain signature. 113 132 IPR018253 -
Accr7g00860 208 Gene3D DnaJ domain 70 173 IPR036869 -
Accr7g00860 208 PRINTS DnaJ domain signature 108 128 IPR001623 -
Accr7g00860 208 PRINTS DnaJ domain signature 92 107 IPR001623 -
Accr7g00860 208 PRINTS DnaJ domain signature 74 92 IPR001623 -
Accr7g00860 208 PRINTS DnaJ domain signature 128 147 IPR001623 -
Accr7g00860 208 Pfam DnaJ domain 72 133 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00860 Accr-Chr7 13842882 13849304 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00860 73 135 C2H2 Transcription Factor Family AT1G74250 44.928 8.64e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00860 K03686 - gmx:100798567 237.269