Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00857 ATGGCTTTATGCCCATTCCTTTGTTTTGGAAAGGGTTCGGATCGCGCACGAGGGAAGGCACAACCAACATGGCGAGTCTTTTCCTTAAAGGAACTACACTCAGCGACAAATAATTTCAATTATGATAATAAACTTGGAGAAGGGGGTTTTGGCAGTGTTTACTGGGGCCAGCTTTGGGATGGATCACAAATTGCAGTGAAAAGATTGAAAGTTTGGAGCAACAAAGCAGATATGGAATTTGCTGTTGAAGTTGAGCACTCAGCAGAGTGCCTTCTGGATTGGAGCAGACGGATGAGTATCGCAATTGGATCAGCAGAGGGAATCACATATCTTCACCATCAAGCAACTCCACACATCATCCACAGAGATATTAAAGCGAGCAATGTGCTCTTGGATGCAGATTTCCAGGCTCAGGTTGCTGATTTCGGTTTTGCTAAGTTGATCCCCGAGGGGGCAACACATGTGACCACGAGAGTTAAGGGTACCCTTGGCTATCTTGCACCTGAGTATGCTATGTTAGGTAAAGCATCTGAGAGTTGTGATGTCTACAGTTTTGGAATTCTCTTGCTGGAACTTGCAAGTGGTAGGAAACCTATTGAAAAACTGAGTTCAACAATGAAGCGGTCCATAACTGATTGGGCACTACCATTGGTTTTCGAGAAGAAATTTAGTGAAATTGCAGATCCAAGACTAAATGGTGATTATGTGGAAGAAGAACTTAAAAGGGTTGTCTATGTTGCACTTGTCTGTGCTCAGAATCAGCCTGAGAAGAGACCCAACATGCTGGAAGTGGTAGAGCTATTGAAGGGAGAATCAGAAGTTAAGTTTTCTCAGCTAGAGAATCATGAACTTTTTAGAAGCCCTCAACCTACTGATTCCAATGAGGACAGGATAGAAGCTGCTGAGGATAGTTCAGCAAAAATTGAATCAAAACCCGAGTTGAAGGAGAACCCTGAGCCATAA 963 0.4341 MALCPFLCFGKGSDRARGKAQPTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAVEVEHSAECLLDWSRRMSIAIGSAEGITYLHHQATPHIIHRDIKASNVLLDADFQAQVADFGFAKLIPEGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGRKPIEKLSSTMKRSITDWALPLVFEKKFSEIADPRLNGDYVEEELKRVVYVALVCAQNQPEKRPNMLEVVELLKGESEVKFSQLENHELFRSPQPTDSNEDRIEAAEDSSAKIESKPELKENPEP 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00857 320 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 25 85 - -
Accr7g00857 320 Gene3D Transferase(Phosphotransferase) domain 1 87 287 - -
Accr7g00857 320 ProSitePatterns Protein kinases ATP-binding region signature. 45 67 IPR017441 GO:0005524
Accr7g00857 320 Gene3D Phosphorylase Kinase; domain 1 11 86 - -
Accr7g00857 320 Pfam Protein kinase domain 99 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00857 320 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Accr7g00857 320 SMART serkin_6 39 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00857 320 MobiDBLite consensus disorder prediction 279 320 - -
Accr7g00857 320 SUPERFAMILY Protein kinase-like (PK-like) 21 268 IPR011009 -
Accr7g00857 320 MobiDBLite consensus disorder prediction 289 320 - -
Accr7g00857 320 FunFam PTI1-like tyrosine-protein kinase At3g15890 76 284 - -
Accr7g00857 320 ProSiteProfiles Protein kinase domain profile. 1 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00857 Accr-Chr7 13806299 13809117 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00857 27 274 Trihelix Transcription Factor Family AT1G70460 43.151 1.26e-72 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Accr7g00857 Pkinase 3.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00857 - - pcin:129289859 567.385