Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00856 ATGGCTTTATGCCCATTCCTTTGTTTTGGAAAGGGTTCGGATCGCGCACGAGGGAAGGCACAACCAACATGGCGAGTCTTTTCCTTAAAGGAACTACACTCAGCGACAAATAATTTCAATTATGATAATAAACTTGGAGAAGGGGGTTTTGGCAGTGTTTACTGGGGCCAGCTTTGGGATGGATCACAAATTGCAGTGAAAAGATTGAAAGTTTGGAGCAACAAAGCAGATATGGAATTTGCTGTTGAAGTTGAGGTATTGGCAAGAGTTCGACACAAGAATCTTCTTAGTCTGCGGGGCTATTGTGCTGAAGGACAGGAACGGTTAATTGTATATGACTATATGCCAAATTTGAGCTTACTTTCTCATCTTCATGGACAGCACTCAGCAGAGTGCCTTCTGGATTGGAGCAGACGGATGAGTATCGCAATTGGATCAGCAGAGGGAATCACATATCTTCACCATCAAGCAACTCCACACATCATCCACAGAGATATTAAAGCGAGCAATGTGCTCTTGGATGCAGATTTCCAGGCTCAGGTTGCTGATTTCGGTTTTGCTAAGTTGATCCCCGAGGGGGCAACACATGTGACCACGAGAGTTAAGGGTACCCTTGGCTATCTTGCACCTGAGTATGCTATGTTAGGTAAAGCATCTGAGAGTTGTGATGTCTACAGTTTTGGAATTCTCTTGCTGGAACTTGCAAGTGGTAGGAAACCTATTGAAAAACTGAGTTCAACAATGAAGCGGTCCATAACTGATTGGGCACTACCATTGGTTTTCGAGAAGAAATTTAGTGAAATTGCAGATCCAAGACTAAATGGTGATTATGTGGAAGAAGAACTTAAAAGGGTTGTCTATGTTGCACTTGTCTGTGCTCAGAATCAGCCTGAGAAGAGACCCAACATGCTGGAAGTGGTAGAGCTATTGAAGGGAGAATCAGAAGTTAAGTTTTCTCAGCTAGAGAATCATGAACTTTTTAGAAGCCCTCAACCTACTGATTCCAATGAGGACAGGATAGAAGCTGCTGAGGATAGTTCAGCAAAAATTGAATCAAAACCCGAGTTGAAGGAGAACCCTGAGCCATAA 1089 0.4316 MALCPFLCFGKGSDRARGKAQPTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAVEVEVLARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSAECLLDWSRRMSIAIGSAEGITYLHHQATPHIIHRDIKASNVLLDADFQAQVADFGFAKLIPEGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGRKPIEKLSSTMKRSITDWALPLVFEKKFSEIADPRLNGDYVEEELKRVVYVALVCAQNQPEKRPNMLEVVELLKGESEVKFSQLENHELFRSPQPTDSNEDRIEAAEDSSAKIESKPELKENPEP 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00856 362 Gene3D Phosphorylase Kinase; domain 1 12 114 - -
Accr7g00856 362 SUPERFAMILY Protein kinase-like (PK-like) 21 310 IPR011009 -
Accr7g00856 362 FunFam PTI1-like tyrosine-protein kinase At3g15890 115 326 - -
Accr7g00856 362 ProSitePatterns Protein kinases ATP-binding region signature. 45 67 IPR017441 GO:0005524
Accr7g00856 362 PANTHER OS01G0253100 PROTEIN 21 315 - -
Accr7g00856 362 CDD STKc_IRAK 45 312 - -
Accr7g00856 362 Pfam Protein kinase domain 40 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00856 362 SMART serkin_6 39 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00856 362 MobiDBLite consensus disorder prediction 331 362 - -
Accr7g00856 362 ProSiteProfiles Protein kinase domain profile. 39 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00856 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Accr7g00856 362 FunFam PTI1-like tyrosine-protein kinase At3g15890 11 114 - -
Accr7g00856 362 Gene3D Transferase(Phosphotransferase) domain 1 115 327 - -
Accr7g00856 362 MobiDBLite consensus disorder prediction 321 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00856 Accr-Chr7 13806299 13809117 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00856 27 316 Trihelix Transcription Factor Family AT1G70460 50.000 3.63e-97 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Accr7g00856 Pkinase 5.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00856 - - pcin:129289859 665.611