Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00854 ATGGCTTTATGCCCATTCCTTTGTTTTGGAAAGGGTTCGGATCGCAGCGCACGAGGGAAGGCACAACCAACATGGCGAGTCTTTTCCTTAAAGGAACTACACTCAGCGACAAATAATTTCAATTATGATAATAAACTTGGAGAAGGGGGTTTTGGCAGTGTTTACTGGGGCCAGCTTTGGGATGGATCACAAATTGCAGTGAAAAGATTGAAAGTTTGGAGCAACAAAGCAGATATGGAATTTGCTGTTGAAGTTGAGGTATTGGCAAGAGTTCGACACAAGAATCTTCTTAGTCTGCGGGGCTATTGTGCTGAAGGACAGGAACGGTTAATTGTATATGACTATATGCCAAATTTGAGCTTACTTTCTCATCTTCATGGACAGCACTCAGCAGAGTGCCTTCTGGATTGGAGCAGACGGATGAGTATCGCAATTGGATCAGCAGAGGGAATCACATATCTTCACCATCAAGCAACTCCACACATCATCCACAGAGATATTAAAGCGAGCAATGTGCTCTTGGATGCAGATTTCCAGGCTCAGGTTGCTGATTTCGGTTTTGCTAAGTTGATCCCCGAGGGGGCAACACATGTGACCACGAGAGTTAAGGGTACCCTTGGCTATCTTGCACCTGAGTATGCTATGTTAGGTAAAGCATCTGAGAGTTGTGATGTCTACAGTTTTGGAATTCTCTTGCTGGAACTTGCAAGTGGTAGGAAACCTATTGAAAAACTGAGTTCAACAATGAAGCGGTCCATAACTGATTGGGCACTACCATTGGTTTTCGAGAAGAAATTTAGTGAAATTGCAGATCCAAGACTAAATGGTGATTATGTGGAAGAAGAACTTAAAAGGGTTGTCTATGTTGCACTTGTCTGTGCTCAGAATCAGCCTGAGAAGAGACCCAACATGCTGGAAGTGGTAGAGCTATTGAAGGGAGAATCAGAAGTTAAGTTTTCTCAGCTAGAGAATCATGAACTTTTTAGAAGCCCTCAACCTACTGATTCCAATGAGGACAGGATAGAAGCTGCTGAGGATAGTTCAGCAAAAATTGAATCAAAACCCGAGTTGAAGGAGAACCCTGAGCCATAA 1092 0.4322 MALCPFLCFGKGSDRSARGKAQPTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAVEVEVLARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSAECLLDWSRRMSIAIGSAEGITYLHHQATPHIIHRDIKASNVLLDADFQAQVADFGFAKLIPEGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGRKPIEKLSSTMKRSITDWALPLVFEKKFSEIADPRLNGDYVEEELKRVVYVALVCAQNQPEKRPNMLEVVELLKGESEVKFSQLENHELFRSPQPTDSNEDRIEAAEDSSAKIESKPELKENPEP 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00854 363 SMART serkin_6 40 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00854 363 MobiDBLite consensus disorder prediction 332 363 - -
Accr7g00854 363 MobiDBLite consensus disorder prediction 322 363 - -
Accr7g00854 363 PANTHER OS01G0253100 PROTEIN 22 316 - -
Accr7g00854 363 Gene3D Transferase(Phosphotransferase) domain 1 116 328 - -
Accr7g00854 363 ProSiteProfiles Protein kinase domain profile. 40 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00854 363 Gene3D Phosphorylase Kinase; domain 1 11 115 - -
Accr7g00854 363 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524
Accr7g00854 363 FunFam PTI1-like tyrosine-protein kinase At3g15890 116 327 - -
Accr7g00854 363 FunFam PTI1-like tyrosine-protein kinase At3g15890 12 115 - -
Accr7g00854 363 CDD STKc_IRAK 46 313 - -
Accr7g00854 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Accr7g00854 363 SUPERFAMILY Protein kinase-like (PK-like) 21 311 IPR011009 -
Accr7g00854 363 Pfam Protein kinase domain 41 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00854 Accr-Chr7 13806299 13809117 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00854 10 317 Trihelix Transcription Factor Family AT1G70460 48.397 2.59e-97 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Accr7g00854 Pkinase 5.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00854 - - pcin:129289859 670.233