Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00827 ATGGCTCAAATTTTGCTTCATGGGACTCTCCATGTCACGATCTTTGAGGTGGATAGGCTGAAGACTGGTGGTGGCAATATCTTCAGCAAGTTCAAGGAAAATCTTGAGGAGGCAGTCGGTTTTGGAAAGGGAGTTACAAAACTCTATGCAACCATCGATCTTGAGAAGGCCAGAGTTGGAAGGACTAGAATTCTGGAAAATGAACGTTCCAACCCAAGGTGGTATGAGTCTTTTCACATTTATTGTGCTCACATGGCTTCTGATATTATATTCACTGTGAAAGATGCTAATCCTATTGGGGCAACCTTAATTGGAAGAGCACATGTGCCTGTTACGGATGTGTTGGATGGCGAGGAAATAGATAGGTGGGTTGAAATCTTGGATGAGCACAAGAAACCCATTCATGGTGATTCAAAAATCCATGTGAAACTGCAATATTTTGATGTCACCAAAGATCGCAGCTGGGATCGTGGTATTAGAAGTGCTAAGTATCCAGGAGTTCCATACACTTTCTTCTCACAGAGGCAAGGGTGTAAGGTCTCTCTGTACCAAGATGCTCATATCCCAGATGGATTTGTCCCTGATATATCTCTTGCCGGAGGTGAGAAATATGCTCCTCATAGATGTTGGGAGGATGTATTTGATGCAATCACTAATGCCAAGCACTTAATATACATTACCGGTTGGTCTGTATATACTGATATCTCCTTGGTAAGGGATAAAAGGAGGCCAAAGCCAGGGGGAGATATGATGCTTGGTGAGCTTCTCAAGAAAAAGGCAAGTGAAGGTGTCAGGGTTTTAATGCTTGTTTGGGATGATAGAACATCTGTTGGTTTGTTAAAAAAAGATGGATTGATGGCTACTCATGATGAAGAAACGGAGCATTACTTCCAGGGCACTGATGTGCACTGTGTTTTATGCCCCCGCAATCCTGATGACGGGGGAAGCATTATTCAGGACTTGCAAATTTCTACCATGTTCACCCACCATCAGAAGATTGTGGTGGTGGACAGTGCATTGCCAAGTGAAGGATCAGACAAGCGAAGAATTGTTAGTTTTGTTGGGGGTATTGATCTCTGTGACGGTAGATATGATACTCCCTTCCACTCTCTGTTCAGAACTCTGGACACAGCACACCATCATGACTTTCATCAACCCAACTTCCCTGGTGCTGCGATCACAAAAGGTGGTCCCAGGGAGCCTTGGCATGACATCCATTCCCGGCTTGAAGGACCCATTGCTTGGGATGTTTTATTTAACTTTGAACAAAGATGGAGGAAGCAAGGTGGGAAGGATCTGCTTATTCAGTTCAGAGAGCTTGAAGATGTCATCATTCCTCCATCTCCAGTTATGTATCCTGATGATCATGAGACATGGCATGTTCAGTTATTTAGATCTATTGATGGTGGAGCTGCTTTTGGGTTTCCAGAGACTCCTGAAGATGCTGCTAAAGCTGGGCTTGTAAGTGGGAAGGATAATATCATTGATCGTAGTATTCAGGATGCTTATATCCATGCAATTCGGCGAGCAAAGGATTTCATTTATATTGAAAATCAGTACTTCCTTGGAAGCTCTTTTGCTTGGAGCGCTGATGGTATCAAACCTGAGGACATAAATGCTTTGCATGTCATCCCAAAGGAGCTCTCACTTAAAATCGTTAGCAAGATCGAAGCTGGGGAAAGATTCACTGTATATGTTGTGGTCCCAATGTGGCCAGAGGGTGTCCCTGAAAGTGCATCAGTGCAGGCAATATTGGATTGGCAGAGGAGGACAATGGAGATGATGTACAAGGATGTTATTCAGGCACTTAGGGCCAAAGGAATCGATGAAGATCCTCGCAACTATTTGACATTCTTCTGCCTCGGTAATCGGGAGTTGAAGAAACCTGGAGAGTACGAGCCTTCAGAAAAACCTGATTCTGATTCTGATTATTTGAGAGCTCAAGAGGCTCGGCGCTTCATGATCTATGTTCATGCCAAGATGATGATAGTTGATGACGAGTACATAATCGTAGGATCTGCCAACATCAACCAGAGATCAATGGATGGTGCCAGGGACTCAGAGATTGCCATGGGTGCTTATCAACCCTATCATTTGTCTCACAGGCAACAGCCGGCACGGGGTCAGATCCATGGTTTCCGCATGTCATTGTGGTACGAGCACCTTGGCATGCTCGACGATCCCTTCCTCACACCTCAAAGCAAAGAATGTGTTAGGAAGGTGAACCAGATTGCTGACAAGTACTGGGACCTCTATTCAAGTGACTCGCTGGAACACGACCTTCCTGGCCACCTGCTTCGCTATCCCATTGGTATTTCTGAAGAAGGAGAAATCACAGAGCTGCCTGGATTTGAATTCTTCCCAGACACCAAGGCTCGTGTTCTCGGAGGCAAAGCTGACTACATGCCACCAATCCTTACAACCTAG 2427 0.4495 MAQILLHGTLHVTIFEVDRLKTGGGNIFSKFKENLEEAVGFGKGVTKLYATIDLEKARVGRTRILENERSNPRWYESFHIYCAHMASDIIFTVKDANPIGATLIGRAHVPVTDVLDGEEIDRWVEILDEHKKPIHGDSKIHVKLQYFDVTKDRSWDRGIRSAKYPGVPYTFFSQRQGCKVSLYQDAHIPDGFVPDISLAGGEKYAPHRCWEDVFDAITNAKHLIYITGWSVYTDISLVRDKRRPKPGGDMMLGELLKKKASEGVRVLMLVWDDRTSVGLLKKDGLMATHDEETEHYFQGTDVHCVLCPRNPDDGGSIIQDLQISTMFTHHQKIVVVDSALPSEGSDKRRIVSFVGGIDLCDGRYDTPFHSLFRTLDTAHHHDFHQPNFPGAAITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDLLIQFRELEDVIIPPSPVMYPDDHETWHVQLFRSIDGGAAFGFPETPEDAAKAGLVSGKDNIIDRSIQDAYIHAIRRAKDFIYIENQYFLGSSFAWSADGIKPEDINALHVIPKELSLKIVSKIEAGERFTVYVVVPMWPEGVPESASVQAILDWQRRTMEMMYKDVIQALRAKGIDEDPRNYLTFFCLGNRELKKPGEYEPSEKPDSDSDYLRAQEARRFMIYVHAKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPYHLSHRQQPARGQIHGFRMSLWYEHLGMLDDPFLTPQSKECVRKVNQIADKYWDLYSSDSLEHDLPGHLLRYPIGISEEGEITELPGFEFFPDTKARVLGGKADYMPPILTT 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00827 808 SMART C2_3c 9 123 IPR000008 -
Accr7g00827 808 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 149 IPR035892 -
Accr7g00827 808 Gene3D Endonuclease Chain A 476 698 - -
Accr7g00827 808 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 653 680 IPR001736 GO:0003824
Accr7g00827 808 FunFam Phospholipase D delta 200 443 - -
Accr7g00827 808 Gene3D Endonuclease Chain A 199 441 - -
Accr7g00827 808 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 325 363 IPR001736 GO:0003824
Accr7g00827 808 Pfam C2 domain 8 126 IPR000008 -
Accr7g00827 808 Gene3D C2 domain 6 157 IPR035892 -
Accr7g00827 808 PANTHER PHOSPHOLIPASE D 4 796 IPR015679 -
Accr7g00827 808 SUPERFAMILY Phospholipase D/nuclease 150 444 - -
Accr7g00827 808 FunFam Phospholipase D 466 699 - -
Accr7g00827 808 CDD PLDc_pPLDalpha_2 491 700 - -
Accr7g00827 808 CDD C2_plant_PLD 2 147 - -
Accr7g00827 808 SUPERFAMILY Phospholipase D/nuclease 438 738 - -
Accr7g00827 808 Pfam Phospholipase D Active site motif 325 363 IPR001736 GO:0003824
Accr7g00827 808 Pfam Phospholipase D Active site motif 654 680 IPR001736 GO:0003824
Accr7g00827 808 PIRSF PLD_plant 1 808 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Accr7g00827 808 SMART pld_4 325 363 IPR001736 GO:0003824
Accr7g00827 808 SMART pld_4 653 680 IPR001736 GO:0003824
Accr7g00827 808 Pfam Phospholipase D C terminal 726 797 IPR024632 -
Accr7g00827 808 ProSiteProfiles C2 domain profile. 1 124 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00827 Accr-Chr7 13449233 13452305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00827 1 808 Phospholipase D Gene Family (Wang group) AT3G15730 81.381 0.0 1404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00827 K01115 - gmx:100786410 1493.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00788 4 7504280 7508243 Accr7g00827 7 13449233 13452305 ECH
Accr7g00827 7 13449233 13452305 Accr7g00827 7 13449233 13452305 ECH