Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00781 ATGTCTTCGCCGGAGAATCAACCGCAAGATGCCGCTGTCGAGCTCAATTTCAACGACACCGAGCTTACCTTGGGCCTTCCCGGCGCCGCCAAAACCGGTTCCAAACGTGAATTCTCCCACACCCTTGAAGCCTCCTCCACATCTGCTAAATCCCCCGCACAAAAGGCACAGGTTGTGGGGTGGCCGCCGGTAAGGGCGAGCAGGAAGAGCGTGATGAAGAAATGCAAATATGTGAAGGTGGCAGTGGACGGAGCCCCATATCTAAGAAAAGTAGATCTTGAAATGTATCAGAGTTATGATCAGCTTCTCAGCTCCTTAGAAACCATGTTTACCTGCTTAACCATCTGGAATGATTTGAATCAGAAGAATTGTGAGCGTGGAAAGAATAATAATGGAGGGGAATACGTACCCACCTATGAAGACAAAGATGGTGACTGGATGATGGTTGGAGATGTCCCCTGGAACATGTTTGTTGAATCCTGCAAAAGGATAAGGTTGATGATGAGTTCTGAGGAGGCTACTACTGGGTTTGGAGCAAGAAGAGGTTCATCAGAGTGA 558 0.4839 MSSPENQPQDAAVELNFNDTELTLGLPGAAKTGSKREFSHTLEASSTSAKSPAQKAQVVGWPPVRASRKSVMKKCKYVKVAVDGAPYLRKVDLEMYQSYDQLLSSLETMFTCLTIWNDLNQKNCERGKNNNGGEYVPTYEDKDGDWMMVGDVPWNMFVESCKRIRLMMSSEEATTGFGARRGSSE 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00781 185 ProSiteProfiles PB1 domain profile. 75 173 IPR000270 GO:0005515
Accr7g00781 185 MobiDBLite consensus disorder prediction 39 54 - -
Accr7g00781 185 Gene3D - 70 180 - -
Accr7g00781 185 SUPERFAMILY CAD & PB1 domains 67 167 - -
Accr7g00781 185 Pfam AUX/IAA family 73 173 IPR033389 -
Accr7g00781 185 MobiDBLite consensus disorder prediction 24 56 - -
Accr7g00781 185 FunFam Auxin-responsive protein 70 180 - -
Accr7g00781 185 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 15 173 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00781 Accr-Chr7 12710243 12711165 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00781 9 171 B3 DNA Binding Superfamily AT2G46530 29.032 8.75e-11 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Accr7g00781 AUX_IAA 4.1e-48 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00781 K14484 - tcc:18595855 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr7g00781 7 12710243 12711165 Accr7g00781 7 12710243 12711165 ECH