Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00779 ATGATGATGGAAAAAGATGGTGGCTTGGGGCTTGAGATCACGGAGCTGAGGTTGGGTCTTCCTGGGAGGGAGGAGGAGGGGAAGAAGAAGAAGAATGAAAAGAAGAGGCTGTTCTCGGAGATTGATGATGATCATGAGGAGGATGGCAGCGGTGGAGATTATCAGAACAGCTCGTCGGAAGGCGGTTGTATTGGTGGTGACCGGAAGCTGGCGGCAGTAGTGGGGTGGCCGCCGGTGTGCTCGTACAGGAGGAAGAATAGCATGAACAATAATGAAGGGTCGAAAATGTACGTGAAAGTGAGCATGGATGGAGCTCCTTTCTTGCGCAAAATTGACTTGGAAAAGCTTAAGGGTTACTCTGAACTCGCTCTTGCCTTGGAAATGCTCTTTGGTTGCTATGGAATCAAAGAGGCGTTGAAGAATGGAGACAAAAGTGAACACGTTCCCATTTATGAGGACAAAGATGGTGACTGGATGCTTGTTGGAGATGTCCCTTGGGAAATGTTTAAGGAGACATGCAAGAGGTTGAGGATAATGAAGAAATCAGAAGCAAAGGGATTTGGAGTGACACCAAAAGGGTCTCTAAAGGGATATATAGAAGGCGTCACCAACTGA 615 0.4764 MMMEKDGGLGLEITELRLGLPGREEEGKKKKNEKKRLFSEIDDDHEEDGSGGDYQNSSSEGGCIGGDRKLAAVVGWPPVCSYRRKNSMNNNEGSKMYVKVSMDGAPFLRKIDLEKLKGYSELALALEMLFGCYGIKEALKNGDKSEHVPIYEDKDGDWMLVGDVPWEMFKETCKRLRIMKKSEAKGFGVTPKGSLKGYIEGVTN 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00779 204 FunFam Auxin-responsive protein 90 191 - -
Accr7g00779 204 MobiDBLite consensus disorder prediction 1 59 - -
Accr7g00779 204 ProSiteProfiles PB1 domain profile. 95 181 IPR000270 GO:0005515
Accr7g00779 204 MobiDBLite consensus disorder prediction 18 43 - -
Accr7g00779 204 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 9 185 IPR003311 GO:0005634|GO:0006355
Accr7g00779 204 Gene3D - 89 192 - -
Accr7g00779 204 Pfam AUX/IAA family 68 187 IPR033389 -
Accr7g00779 204 SUPERFAMILY CAD & PB1 domains 85 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00779 Accr-Chr7 12697932 12702174 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00779 54 196 B3 DNA Binding Superfamily AT4G23980 33.566 4.98e-13 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Accr7g00779 AUX_IAA 1.6e-43 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00779 K14484 - gmx:547784 250.366