Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00778 ATGGATGTTACCTCTCCAGAACCAAATAGAAACTCCCAAACCGACAGATATCCTTTACTGATGGAGCAGTCTGAAAGCCACCATCAGCATGTAATTGACATCACAAGGAATGGTGATGCTTTATCCAACTCATCTGATGTTGCTCAACTTCCTGAAATACATTTAATGCAGAATGGAGATCAACAGTCCAGTGGTACACGAGAGTCTACTCATCAAACATCTTCCTCATCCAGATTAAACTCTAGAAATTCTTCATCAACTAGAGGTGAGGGGTATCGTCATCGAAGAAGGAATCCATTAAATTCTGGACTATGGATTTCAGTTGAGCTTGTTGTCACTGTGGGTCAGATCATAGCATCTATAGTTGTCTTGTCATTGTCGAGGAACGAAAGTCGACAAGCCCCATTATTTGCATGGGTTGTGGGTTATACATCTGGTTGTGTTGCCACACTTCCTATTCTATATTGGCGTTACCAAAGCCATAATCAAAGTACTGAACAAGTTACATCTCAACAATCTCAAGGATCTTCTAGAAGTGATCATCCATTATCTACCTCATACTCTCATGTTTCAGAAGAAGAGAATAGTCATGTGACAGAATCAGCTGCTAGAAACACCAGGATTCCTGGAGCTTTTTTTTCTAGGCTTAATGGATTAGTAGATCATTTCAAAATGGCCTTAGATTGCTTCTTTGCAGTTTGGTTTGTTGTGGGCAACGTGTGGATCTTTGGAGGCCACTCTTCTCCTTCTAATGCTCCAAAATTGTATAGGTTATGTATCGTGTTTCTTACCTTTAGTTGCATTGGATATGCTATGCCATTTATCCTATGTGCAACAATTTGTTGCTGCCTACCTTGCATAATTTCTGTTCTAGGAATTCGGGAAGATTTTTCTCAAACTAGAGGCGCAACAGTAGAGTCTATCAATGCCCTGCCAATTTACAAGTTCAAATTGAAGAAAACTGAAAATAGTGACAATCAGGATGTCAAAACAGCTACAGATGAAGGTGGCATCTTTGCTGCCGGGACAGAAAAAGAGCGGACCATATCTGGAGAAGATGCTGTTTGTTGCATTTGCTTGGCGAAATATGCTGACAATGATGATCTTAGGGAGTTATCGTGTCTTCATTTCTTCCACGTAGAGTGTGTTGACAAATGGTTGAAGATAAATGCATCATGTCCTCTTTGTAAATGTGATGCCGGCAAGATTAGTGGAGGGTCTCCCTCAGCTGGGGACTCCAGTTAG 1245 0.4088 MDVTSPEPNRNSQTDRYPLLMEQSESHHQHVIDITRNGDALSNSSDVAQLPEIHLMQNGDQQSSGTRESTHQTSSSSRLNSRNSSSTRGEGYRHRRRNPLNSGLWISVELVVTVGQIIASIVVLSLSRNESRQAPLFAWVVGYTSGCVATLPILYWRYQSHNQSTEQVTSQQSQGSSRSDHPLSTSYSHVSEEENSHVTESAARNTRIPGAFFSRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSNAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDFSQTRGATVESINALPIYKFKLKKTENSDNQDVKTATDEGGIFAAGTEKERTISGEDAVCCICLAKYADNDDLRELSCLHFFHVECVDKWLKINASCPLCKCDAGKISGGSPSAGDSS 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00778 414 MobiDBLite consensus disorder prediction 166 186 - -
Accr7g00778 414 ProSiteProfiles Zinc finger RING-type profile. 356 397 IPR001841 -
Accr7g00778 414 MobiDBLite consensus disorder prediction 58 87 - -
Accr7g00778 414 MobiDBLite consensus disorder prediction 58 96 - -
Accr7g00778 414 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 21 399 - -
Accr7g00778 414 SMART ring_2 356 396 IPR001841 -
Accr7g00778 414 SUPERFAMILY RING/U-box 349 403 - -
Accr7g00778 414 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 339 403 IPR013083 -
Accr7g00778 414 Pfam Ring finger domain 356 397 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00778 Accr-Chr7 12654194 12658062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00778 1 407 C3H Transcription Factor Family AT1G80400 56.174 7.93e-161 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00778 - - gmx:100819729 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr7g00778 7 12654194 12658062 Accr7g00778 7 12654194 12658062 ECH