Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00728 ATGTCCGACCATCCTCAACACTATTATCCCTCTCCTGCTCTCTCCCTCAGCCTTGCGGGAATCTTTCGCCGTGATGACGGGGCGAGCAACGCTGAGGTGGTAGAGGCCGGGGAGGAGGCCAGCGGCGGAGGAGAGCGGCGAGACAACACCACTACTACTGTTCATGAGATTAGCAGCGAGAATTCTGGGCTCATCGGAAGATCGTCGAGATCCGACGATGGCTTATTCGACGAAGAAGCCGAGCCCGAAGGTGGCGACGATGTTGAAGGTGACGACGGAGACAACAATAAGAAGAACAAGAAAAAGAGGAAGAGATATCATAGACACACTGCTGAACAGATCAGAGAGATGGAAGCGCTTTTCAAAGAGTCGCCACATCCTGATGAGAAGCAGAGACAACAACTTAGCCAGCAATTAGGCCTCGCTCCTAGGCAAGTCAAATTTTGGTTCCAAAATCGTCGAACCCAAATCAAGGCTATACAAGAGCGGCATGAGAATTTATTACTAAAGTCAGAAATTGATAAACTGAGAGAGGAAAATGAGGCATTGAGAGGGATCATAAACAAATCTTGTTGCCCCAACTGTGGCGTCCCCACCATTTCATCCTCAGATGCTTCGATACCTCCTGAAGAACACCAACTTCGTGTAGAAAATGTCAAACTCAAATCTGAGATCGAGAAGCTTCGAAAAGCAGTAGGAAAGGGCCCACAGGGGATGACTACAGCATCACCTTCTTCGAGCTCTTTGGGAAATGAGCAAGGAATGGAGAACAGAAGCTGTATGGAAATTTACAGTGGAATTTTTGGACTTCAGAAGACAAGGATAATGGAGCTAGTTAACAAAGCAATGGAAGAGCTCATAAAGATGGCCACTATTCAGGAACCATTATGGGTTCGTAGCGTTGAGACTGGTCGCCAAATACTTAATTACGATGAATATGTGAAAGAGTTCAATGTTGAACTCTCCTCCTCCTCGTCAAAGAGATACTCCATTGAAGCTTCGAGAGAAACTGCGGTTGTGTTTTTGGATCTCCCTCGTATTCTTCAAATCTTCTTGGACGTGAATCAATGGAAGGAGATGTTTCCGAGCTTAATATCTAAGGCTGCTATTGTTGATGTTATTTGTAGTGGTGAAGGTGCCAACAGGGATGGTACGGTGCAACTGATGTTTAGCGAGGTGCAAATGGTGACACCAATGGTGGGGAGTAGAGAAGTGTATTTTGTGAGGTACTGCAAGAAATTGAAGGAAGAAGAGTGGGCAATAGTGGATGTATCCATAGAAAATGTACAAGACACTATTGAGGCTTCTCTCCTAAAATGCAGAAAACGCCCTTCTGGCTGCATCATTCAGGATACCAACAACGGCCACTGCAAGGTGACATGGGTGGAGCACATAGAATGTGAGAAGAGCACGGTCCACACAATGTACCGGAGCATAGTGAAGAGCGGGCTGGCGTTCGGGGCGAGGCGGTGGCTGGGGACGTTACAACAGCAATGTCAGAGACTGATGTTCGTGATGGCGACGAATGTGCCGATGAAGGAGTCGGTGGGAGTGGGGACGGCGGCGGGGAGGAAGAGCGTGATGAGGTTGGCACAGAGAATGAGTAAGAATTTCTGTCACGCCGTGGGGGCTTCAAGCTTGCATACATGGAGCAAGTACAGTGGAGAGAATGGATTAGACATTAGGGTCAGCTCTAGAAAGAACTTGAGTGATCGTGGAGAGCCTCTTGGTCTTATACTATGTGCTGTTTCTTGTGCCTCGCTTCCCCTCTCTCCTCGCCTTCTCGTCGACTTCTTGAGGGACGAAGCTCGACGTTCTCAGTGGCAAGTGACTACTGGTGGTGAGCACGTGCGGTCCTTCGTAAACTTGGCCAAAGGAAAAGATCGAGGCAACGCCGTAACCATCATGGAAGTAAAATCGAAAGATGAGAGTAACTGTACGTGGATTCTGCAAGACAGCAGCACGAGTACGTACGAATCAACGGTGGTGTATGCTCCGGTGGACATCACCCGCATGCAGTCAGTGATCGCCGGCTGCGACTCCAGCGACGTCCCGATTCTGCCGTCTGGATTCTCCGTCATCCCCGACGGACTGGATGCCATAAGACCGTTAATGATAACTTCTTCTTCATCAATGCATCGAGGAGGAGAAGAAGGAGAAGAAGAAGAAAAGAACACAGAAGGAGGATCTCTGCTTACAATAGCATTTCAGGCCCTCGTCAGTACTTGTCCTTCTGATAAGCTAACACACGAGTCCCTTGAATCTGTCAGTAGTGTTATGTCTTGTACCTTGAGAAATATCAAAACAAGCTTACAGTGTGATGATAGCTAG 2331 0.4813 MSDHPQHYYPSPALSLSLAGIFRRDDGASNAEVVEAGEEASGGGERRDNTTTTVHEISSENSGLIGRSSRSDDGLFDEEAEPEGGDDVEGDDGDNNKKNKKKRKRYHRHTAEQIREMEALFKESPHPDEKQRQQLSQQLGLAPRQVKFWFQNRRTQIKAIQERHENLLLKSEIDKLREENEALRGIINKSCCPNCGVPTISSSDASIPPEEHQLRVENVKLKSEIEKLRKAVGKGPQGMTTASPSSSSLGNEQGMENRSCMEIYSGIFGLQKTRIMELVNKAMEELIKMATIQEPLWVRSVETGRQILNYDEYVKEFNVELSSSSSKRYSIEASRETAVVFLDLPRILQIFLDVNQWKEMFPSLISKAAIVDVICSGEGANRDGTVQLMFSEVQMVTPMVGSREVYFVRYCKKLKEEEWAIVDVSIENVQDTIEASLLKCRKRPSGCIIQDTNNGHCKVTWVEHIECEKSTVHTMYRSIVKSGLAFGARRWLGTLQQQCQRLMFVMATNVPMKESVGVGTAAGRKSVMRLAQRMSKNFCHAVGASSLHTWSKYSGENGLDIRVSSRKNLSDRGEPLGLILCAVSCASLPLSPRLLVDFLRDEARRSQWQVTTGGEHVRSFVNLAKGKDRGNAVTIMEVKSKDESNCTWILQDSSTSTYESTVVYAPVDITRMQSVIAGCDSSDVPILPSGFSVIPDGLDAIRPLMITSSSSMHRGGEEGEEEEKNTEGGSLLTIAFQALVSTCPSDKLTHESLESVSSVMSCTLRNIKTSLQCDDS 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00728 776 FunFam Homeobox-leucine zipper protein HDG1 89 176 - -
Accr7g00728 776 MobiDBLite consensus disorder prediction 231 253 - -
Accr7g00728 776 Pfam START domain 278 501 IPR002913 GO:0008289
Accr7g00728 776 MobiDBLite consensus disorder prediction 54 68 - -
Accr7g00728 776 CDD homeodomain 107 158 IPR001356 GO:0003677
Accr7g00728 776 FunFam Homeobox-leucine zipper protein GLABRA 2 277 500 - -
Accr7g00728 776 Coils Coil 159 186 - -
Accr7g00728 776 SUPERFAMILY Bet v1-like 270 501 - -
Accr7g00728 776 Gene3D - 89 170 - -
Accr7g00728 776 Pfam Homeodomain 103 158 IPR001356 GO:0003677
Accr7g00728 776 CDD START_ArGLABRA2_like 272 500 - -
Accr7g00728 776 ProSiteProfiles 'Homeobox' domain profile. 100 160 IPR001356 GO:0003677
Accr7g00728 776 SMART HOX_1 101 164 IPR001356 GO:0003677
Accr7g00728 776 Gene3D - 276 501 IPR023393 -
Accr7g00728 776 MobiDBLite consensus disorder prediction 30 110 - -
Accr7g00728 776 Coils Coil 211 231 - -
Accr7g00728 776 SMART START_1 277 501 IPR002913 GO:0008289
Accr7g00728 776 MobiDBLite consensus disorder prediction 238 253 - -
Accr7g00728 776 ProSitePatterns 'Homeobox' domain signature. 135 158 IPR017970 GO:0000981|GO:0006355
Accr7g00728 776 MobiDBLite consensus disorder prediction 39 53 - -
Accr7g00728 776 SUPERFAMILY Bet v1-like 523 699 - -
Accr7g00728 776 ProSiteProfiles START domain profile. 268 504 IPR002913 GO:0008289
Accr7g00728 776 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 101 772 IPR042160 -
Accr7g00728 776 SUPERFAMILY Homeodomain-like 92 161 IPR009057 -
Accr7g00728 776 MobiDBLite consensus disorder prediction 76 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00728 Accr-Chr7 11789211 11795003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00728 57 775 Homeobox Transcription Factor Family AT1G79840 56.690 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Accr7g00728 START 1.6e-54 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00728 K09338 - qsu:111988083 967.222