Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00716 ATGTCTAGGCTACTTGAACATGATTACATAGGCTTAGCAGAGAAGCCTTCCATGGAAATCTCTGAAAAAAGCTCACATCTCAACTTGAACTTGAAGGAGACAGAGCTCAGACTTGGGCTTCCTGGTTCTGAATCTCCAGAGAGAAAACCAACAAACTTAATATCTCTGTTTGGGAAGGATTTGCGGAACACAAATGCCTTGAAGAACCTTGTTGCTGGCTCTAAGAGAGGCTTTTCTGATGATGCCGTTGTTGATTTTGAGGGTAAAATAAATAATACCCACAAGGCTTCTCAATCTGCCAAACCAAAACAGGACAAGAAGCCAGAGATTTCTGAAACAAACGACCATGTTAGTCCTCCTTCTTCAAAGGAGCAGGTTGTGGGGTGGCCACCGATTCGATCCTTTCGGAGGAACACGATGGCCTGTAGCTTGATAAAGAACAAGGACGACGATGAAGAAGAAGAGCGAAAACCATCAGAAGCAAGTGGTTTTCTTTATGTAAAAGTTAGCATGGATGGTGCTCCATATCTCAGAAAGGTTGATCTCAGAATGTACACCAACTATATGCAACTTTCTTCAGCTCTTGAGCAAATGTTCACTTGCTTCACCATTGGTGAATGCAATTCTGGTGGGTTTCCTGGGAAAGATGGTCTGAGTGAGAGCTCTTTGAGGGATCTTCTTCATGTGTCTGTTCATGTTGTTACATATGAAGACAAAGATGGAGATTGGATGCTTGTTGGTGATGTCCCATGGGAGATGTTCACTGAATCATGCAGGAGACTGAGGATCATGAAAGGTTCTGAAGCAATTGGGTTAGCTCCCAGGGCCATGGAAAAAAAGGGCTGGAGCCACAATAACAATTGCAGAAGAATCAAATAG 879 0.4323 MSRLLEHDYIGLAEKPSMEISEKSSHLNLNLKETELRLGLPGSESPERKPTNLISLFGKDLRNTNALKNLVAGSKRGFSDDAVVDFEGKINNTHKASQSAKPKQDKKPEISETNDHVSPPSSKEQVVGWPPIRSFRRNTMACSLIKNKDDDEEEERKPSEASGFLYVKVSMDGAPYLRKVDLRMYTNYMQLSSALEQMFTCFTIGECNSGGFPGKDGLSESSLRDLLHVSVHVVTYEDKDGDWMLVGDVPWEMFTESCRRLRIMKGSEAIGLAPRAMEKKGWSHNNNCRRIK 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00716 292 ProSiteProfiles PB1 domain profile. 164 266 IPR000270 GO:0005515
Accr7g00716 292 MobiDBLite consensus disorder prediction 93 130 - -
Accr7g00716 292 SUPERFAMILY CAD & PB1 domains 156 265 - -
Accr7g00716 292 Pfam AUX/IAA family 33 275 IPR033389 -
Accr7g00716 292 Gene3D - 159 277 - -
Accr7g00716 292 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 29 271 IPR003311 GO:0005634|GO:0006355
Accr7g00716 292 MobiDBLite consensus disorder prediction 99 113 - -
Accr7g00716 292 FunFam Auxin-responsive protein 159 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00716 Accr-Chr7 11582056 11583609 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00716 138 269 B3 DNA Binding Superfamily AT2G46530 27.273 4.65e-06 45.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Accr7g00716 AUX_IAA 3.8e-87 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00716 K14484 - gmx:100804423 352.443