Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00715 ATGATCCTTGTCCCAAATTATGCTACGTACAGGAAAAGAGATGGCTTCCTCATTTCCCTCCTATTAAAAAAAAAAAAAAAATTCCTTTGTTTGGTGGCGAGCGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGTTGGCTATAGAAAGGTCCAAGAAGGTTCTTTTTCTGCGTCAACAAAACCATCTTCTTTTTCAGTTCTTTTTCTAACGCTACTTGAACATGATTACATAGGCTTAGCAGAGAAGCCTTCCATGGAAATCTCTGAAAAAAGCTCACATCTCAACTTGAACTTGAAGGAGACAGAGCTCAGACTTGGGCTTCCTGGTTCTGAATCTCCAGAGAGAAAACCAACAAACTTAATATCTCTGTTTGGGAAGGATTTGCGGAACACAAATGCCTTGAAGAACCTTGTTGCTGGCTCTAAGAGAGGCTTTTCTGATGATGCCGTTGTTGATTTTGAGGGTAAAATAAATAATACCCACAAGGCTTCTCAATCTGCCAAACCAAAACAGGACAAGAAGCCAGAGATTTCTGAAACAAACGACCATGTTAGTCCTCCTTCTTCAAAGGAGCAGGTTGTGGGGTGGCCACCGATTCGATCCTTTCGGAGGAACACGATGGCCTGTAGCTTGATAAAGAACAAGGACGACGATGAAGAAGAAGAGCGAAAACCATCAGAAGCAAGTGGTTTTCTTTATGTAAAAGTTAGCATGGATGGTGCTCCATATCTCAGAAAGGTTGATCTCAGAATGTACACCAACTATATGCAACTTTCTTCAGCTCTTGAGCAAATGTTCACTTGCTTCACCATTGGTGAATGCAATTCTGGTGGGTTTCCTGGGAAAGATGGTCTGAGTGAGAGCTCTTTGAGGGATCTTCTTCATGTGTCTGTTCATGTTGTTACATATGAAGACAAAGATGGAGATTGGATGCTTGTTGGTGATGTCCCATGGGAGATGTTCACTGAATCATGCAGGAGACTGAGGATCATGAAAGGTTCTGAAGCAATTGGGTTAGCTCCCAGGGCCATGGAAAAAAAGGGCTGGAGCCACAATAACAATTGCAGAAGAATCAAATAG 1080 0.4231 MILVPNYATYRKRDGFLISLLLKKKKKFLCLVASERKRERERERVGYRKVQEGSFSASTKPSSFSVLFLTLLEHDYIGLAEKPSMEISEKSSHLNLNLKETELRLGLPGSESPERKPTNLISLFGKDLRNTNALKNLVAGSKRGFSDDAVVDFEGKINNTHKASQSAKPKQDKKPEISETNDHVSPPSSKEQVVGWPPIRSFRRNTMACSLIKNKDDDEEEERKPSEASGFLYVKVSMDGAPYLRKVDLRMYTNYMQLSSALEQMFTCFTIGECNSGGFPGKDGLSESSLRDLLHVSVHVVTYEDKDGDWMLVGDVPWEMFTESCRRLRIMKGSEAIGLAPRAMEKKGWSHNNNCRRIK 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00715 359 Pfam AUX/IAA family 100 342 IPR033389 -
Accr7g00715 359 SUPERFAMILY CAD & PB1 domains 223 332 - -
Accr7g00715 359 FunFam Auxin-responsive protein 226 343 - -
Accr7g00715 359 MobiDBLite consensus disorder prediction 166 180 - -
Accr7g00715 359 MobiDBLite consensus disorder prediction 160 197 - -
Accr7g00715 359 ProSiteProfiles PB1 domain profile. 231 333 IPR000270 GO:0005515
Accr7g00715 359 Gene3D - 226 344 - -
Accr7g00715 359 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 96 338 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00715 Accr-Chr7 11582056 11583905 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00715 205 336 B3 DNA Binding Superfamily AT2G46530 27.273 6.11e-06 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Accr7g00715 AUX_IAA 7.5e-87 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00715 K14484 - gmx:100804423 347.436