Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00708 ATGACACTTCTCCTCACTGAATCTCCTGTCTCCTCTGAAACTTGTTCATCATCTTCCTCCTCTGATTCCAAACCTCAATCACAACACACTACCACCACCAGACCTGCCAAAAGACCCCGACCTTCTCCCTCTACTTCTTCTTCTTCATCGTCTTCTTCTTCTTCTACTTCTTCTGATTCTTCCGGCAAGCTCCCGCACTACCGTGGCGTCAGAATGCGAAGCTGGGGCAAATGGGTGTCCGAGATTCGCGAGCCACGCAAGAAGTCTCGCATCTGGCTTGGCACTTTCGCCACTCCGGAAATGGCCGCTCGAGCCCACGACGTTGCCGCTCTCTCCATCAAAGGCAAATCCGCCATTCTCAACTTCCCTCAGCTTGCCGCCCTCCTTCCCAGACCCGCCACGTGCTCCCCACGTGACATCCAAACCGCAGCTTCCGCCGCCGCCGCCATGGTCAAGTACGACACCGTGCAGACCTCAGAAGCGTCCGGGTCTCAGTCATCACCATCGTCAGAGTCGTCAGAGCTGAGTGAGATTGTGGAATTGCCGACTATAGAAGAAGAGAGCTTCCACTCCGCCGAGTCAATGACCGAGTTCTTATGGATGGACTCGGCAGATAGTTGGGTGTTTCCAGGTATGGGTATGGGTTCGGACTATTCAGAACTGATGATGAGCTCCATTTTCTCCCAGCAACTCTCAGAGGAGATGCCACTCTGGGATTAA 720 0.5389 MTLLLTESPVSSETCSSSSSSDSKPQSQHTTTTRPAKRPRPSPSTSSSSSSSSSSTSSDSSGKLPHYRGVRMRSWGKWVSEIREPRKKSRIWLGTFATPEMAARAHDVAALSIKGKSAILNFPQLAALLPRPATCSPRDIQTAASAAAAMVKYDTVQTSEASGSQSSPSSESSELSEIVELPTIEEESFHSAESMTEFLWMDSADSWVFPGMGMGSDYSELMMSSIFSQQLSEEMPLWD 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00708 239 Gene3D AP2/ERF domain 66 124 IPR036955 GO:0003700|GO:0006355
Accr7g00708 239 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Accr7g00708 239 PRINTS Ethylene responsive element binding protein signature 89 105 IPR001471 GO:0003700|GO:0006355
Accr7g00708 239 SMART rav1_2 66 129 IPR001471 GO:0003700|GO:0006355
Accr7g00708 239 CDD AP2 65 123 IPR001471 GO:0003700|GO:0006355
Accr7g00708 239 MobiDBLite consensus disorder prediction 1 63 - -
Accr7g00708 239 MobiDBLite consensus disorder prediction 159 177 - -
Accr7g00708 239 Pfam AP2 domain 65 115 IPR001471 GO:0003700|GO:0006355
Accr7g00708 239 MobiDBLite consensus disorder prediction 159 178 - -
Accr7g00708 239 ProSiteProfiles AP2/ERF domain profile. 66 123 IPR001471 GO:0003700|GO:0006355
Accr7g00708 239 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 45 190 - -
Accr7g00708 239 MobiDBLite consensus disorder prediction 1 67 - -
Accr7g00708 239 FunFam Ethylene-responsive transcription factor 2 66 124 - -
Accr7g00708 239 SUPERFAMILY DNA-binding domain 66 124 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00708 Accr-Chr7 11491056 11491775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00708 46 210 AP2-EREBP Transcription Factor Family AT5G11590 54.444 3.77e-53 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr7g00708 AP2 4.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00708 K09286 - pcin:129291592 266.159