Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00701 ATGGAACTACCGGAGTGTTTTGTGGGTGGCTATTTCTCAACTGGAGGAGATCAATTCTCGTCGGAGAAGCGTCATGGCGCTGACCAGAAGCCTGGTGAGTCCTTCGCCATTGACGACCTCCTTGACTTCTCCAACGCCGACGCTATGATCATGTCCGACGGTTTCTTCGATAATGCCGCCGGAATCTCCACTGACTCATCCACTGTCACCGCCGTTGACAGCTGTAATTCTTCCGTTTCCGGCGGTGACAATCATTTCTCCTCCGGTTACTCTGCCTCCCGCGGTTTCGGTGATCCTCAATTATCTGGAGAACTCTGCGTTCCGTTTGACGACATGGCTGAACTGGAATGGCTATCGAACTTCGTGGAAGACTCATTTTCGGTCGAAGATGAGTTAAAAACACTTCACCTCCTCTCCGGCACTACTGCTTCCGCCATCGGAACGAAACCTCAGACACCGGAGTCCTCCTCTTCCTCCGAAACAATTCCACCCTTCGCCGCCGAGACCGGTAGAAATGCGCCGATGTTCCATCCAGAAACTCCGCTTCCAGGTAAAGCTCGGAGCAAGCGTAATCGCGCTGCCCCAGGGGATTGGTCTACGCGCCTCCTCAACCTGATCACCCCGACGGTAGTTTCAGAACCGGCGCAAGCGAAGCCGGTAGCGGCGAAGAAAAGAGAGAGTTCGAATTCGGAGTTTTCTTCGGGTCGGAAATGCATGCATTGCGCCTCCGAGAGGACTCCACAATGGCGGACTGGACCAATGGGTCCGAAGACTCTGTGCAATGCTTGTGGAGTCCGGTACAAGTCCGGGAGGCTAGTGCCGGAGTACCGACCGGCGGCGAGCCCGACTTTTGTATCGTCAAAACACTCCAATTCGCACAGGAAGGTAATCGAGATGAGGAGGCAGAAGGAATTGCAGAGGCAGCAACAACATCAATTGGTTAGCCAGAGTTCAATTTTCGGCGTTTCTCATGGAGGAGATGAGTTCATGATCCCTCATACCAGTGGTCCAGATTATAGGCACATGATCTAG 1032 0.5349 MELPECFVGGYFSTGGDQFSSEKRHGADQKPGESFAIDDLLDFSNADAMIMSDGFFDNAAGISTDSSTVTAVDSCNSSVSGGDNHFSSGYSASRGFGDPQLSGELCVPFDDMAELEWLSNFVEDSFSVEDELKTLHLLSGTTASAIGTKPQTPESSSSSETIPPFAAETGRNAPMFHPETPLPGKARSKRNRAAPGDWSTRLLNLITPTVVSEPAQAKPVAAKKRESSNSEFSSGRKCMHCASERTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSSKHSNSHRKVIEMRRQKELQRQQQHQLVSQSSIFGVSHGGDEFMIPHTSGPDYRHMI 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00701 343 Gene3D - 233 316 IPR013088 GO:0006355|GO:0008270
Accr7g00701 343 PIRSF Txn_fac_GATA_plant 19 324 IPR016679 GO:0003677|GO:0005634|GO:0045893
Accr7g00701 343 MobiDBLite consensus disorder prediction 144 195 - -
Accr7g00701 343 PANTHER GATA TRANSCRIPTION FACTOR 30 310 - -
Accr7g00701 343 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 235 295 - -
Accr7g00701 343 CDD ZnF_GATA 237 284 IPR000679 GO:0006355|GO:0043565
Accr7g00701 343 ProSitePatterns GATA-type zinc finger domain. 238 263 IPR000679 GO:0006355|GO:0043565
Accr7g00701 343 FunFam GATA transcription factor 227 313 - -
Accr7g00701 343 MobiDBLite consensus disorder prediction 144 165 - -
Accr7g00701 343 ProSiteProfiles GATA-type zinc finger domain profile. 232 268 IPR000679 GO:0006355|GO:0043565
Accr7g00701 343 SMART GATA_3 232 282 IPR000679 GO:0006355|GO:0043565
Accr7g00701 343 Pfam GATA zinc finger 238 271 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00701 Accr-Chr7 11410275 11411521 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00701 33 343 C2C2-Gata Transcription Factor Family AT4G32890 45.141 1.10e-79 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Accr7g00701 GATA 9.5e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00701 - - gmx:100776605 453.751