Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00700 ATGTTAATGGAACTACCGGAGTGTTTTGTGGGTGGCTATTTCTCAACTGGAGGAGATCAATTCTCGTCGGAGAAGCGTCATGGCGCTGACCAGAAGCCTGGTGAGTCCTTCGCCATTGACGACCTCCTTGACTTCTCCAACGCCGACGCTATGATCATGTCCGACGGTTTCTTCGATAATGCCGCCGGAATCTCCACTGACTCATCCACTGTCACCGCCGTTGACAGCTGTAATTCTTCCGTTTCCGGCGGTGACAATCATTTCTCCTCCGGTTACTCTGCCTCCCGCGGTTTCGGTGATCCTCAATTATCTGGAGAACTCTGCGTTCCGTTTGACGACATGGCTGAACTGGAATGGCTATCGAACTTCGTGGAAGACTCATTTTCGGTCGAAGATGAGTTAAAAACACTTCACCTCCTCTCCGGCACTACTGCTTCCGCCATCGGAACGAAACCTCAGACACCGGAGTCCTCCTCTTCCTCCGAAACAATTCCACCCTTCGCCGCCGAGACCGGTAGAAATGCGCCGATGTTCCATCCAGAAACTCCGCTTCCAGGTAAAGCTCGGAGCAAGCGTAATCGCGCTGCCCCAGGGGATTGGTCTACGCGCCTCCTCAACCTGATCACCCCGACGGTAGTTTCAGAACCGGCGCAAGCGAAGCCGGTAGCGGCGAAGAAAAGAGAGAGTTCGAATTCGGAGTTTTCTTCGGGTCGGAAATGCATGCATTGCGCCTCCGAGAGGACTCCACAATGGCGGACTGGACCAATGGGTCCGAAGACTCTGTGCAATGCTTGTGGAGTCCGGTACAAGTCCGGGAGGCTAGTGCCGGAGTACCGACCGGCGGCGAGCCCGACTTTTGTATCGTCAAAACACTCCAATTCGCACAGGAAGGTAATCGAGATGAGGAGGCAGAAGGAATTGCAGAGGCAGCAACAACATCAATTGGTTAGCCAGAGTTCAATTTTCGGCGTTTCTCATGGAGGAGATGAGTTCATGATCCCTCATACCAGTGGTCCAGATTATAGGCACATGATCTAG 1038 0.5328 MLMELPECFVGGYFSTGGDQFSSEKRHGADQKPGESFAIDDLLDFSNADAMIMSDGFFDNAAGISTDSSTVTAVDSCNSSVSGGDNHFSSGYSASRGFGDPQLSGELCVPFDDMAELEWLSNFVEDSFSVEDELKTLHLLSGTTASAIGTKPQTPESSSSSETIPPFAAETGRNAPMFHPETPLPGKARSKRNRAAPGDWSTRLLNLITPTVVSEPAQAKPVAAKKRESSNSEFSSGRKCMHCASERTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSSKHSNSHRKVIEMRRQKELQRQQQHQLVSQSSIFGVSHGGDEFMIPHTSGPDYRHMI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00700 345 ProSiteProfiles GATA-type zinc finger domain profile. 234 270 IPR000679 GO:0006355|GO:0043565
Accr7g00700 345 MobiDBLite consensus disorder prediction 146 197 - -
Accr7g00700 345 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 237 297 - -
Accr7g00700 345 PANTHER GATA TRANSCRIPTION FACTOR 32 312 - -
Accr7g00700 345 FunFam GATA transcription factor 229 315 - -
Accr7g00700 345 Pfam GATA zinc finger 240 273 IPR000679 GO:0006355|GO:0043565
Accr7g00700 345 CDD ZnF_GATA 239 286 IPR000679 GO:0006355|GO:0043565
Accr7g00700 345 PIRSF Txn_fac_GATA_plant 21 326 IPR016679 GO:0003677|GO:0005634|GO:0045893
Accr7g00700 345 Gene3D - 235 318 IPR013088 GO:0006355|GO:0008270
Accr7g00700 345 MobiDBLite consensus disorder prediction 146 167 - -
Accr7g00700 345 SMART GATA_3 234 284 IPR000679 GO:0006355|GO:0043565
Accr7g00700 345 ProSitePatterns GATA-type zinc finger domain. 240 265 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00700 Accr-Chr7 11410269 11411521 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00700 35 345 C2C2-Gata Transcription Factor Family AT4G32890 45.141 1.24e-79 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Accr7g00700 GATA 9.6e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00700 - - gmx:100776605 453.751