Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00686 ATGAATGGTAGGTCAAGAAACGAGGAGGCGTTTCCTCAGCTGCTAGATTTGATCCCAAAAGACCGAGAGTGGCATGAAAACAGAGCCCACAAGTTTTCAGAAGAGAGGAAACTTGAGCTCAGACTTGGTCCACCTGGCGAAGAGGAAGACGACGTCGTTAGAGGTAGAAAGGAGTCTCTGCTCTCTCTTGGTTACTTCTCAGCCTCCGTTAATGGAGGTCACACCCAGAAACCTGTGTCTCCTCCTTGGGCTTCTTCTTCGAAGACTCAGAACATTAATCAACAGAAAGGGGTTTCAGTTTCATCATCATTCCTACAGCCTCAACCCTCTCCTCCTGCAAATACAGCTGTACCCAACAGCTCTCAGAAAAGAACTGCTCCTGGTCCAGTAGTGGGGTGGCCTCCAATTCGCTCATTTAGGAAGAACCTTGCAAGTAGTAGCACTTCCAAGGTTGTTTCTCAACATGAGTCTCAAAATCATCAGCAGCGTGTGGTTGTTGAAGATAAGGTTGCTGGGAAGAAACCTGTGGCTGACAACAACAACAACGTTGCTGTTGGTGGTAATAAAAGCCTGTTTGTGAAGATCAATATGGATGGAGTTCCCATAGGCAGAAAAGTGGACCTTAATGCTTACTATAGCTATGAAAAACTCTCCTCTGCTGTTGAAGAGCTCTTCAGAGACCTCCTTGCTGCTCAAAGAGATTCCTGTGGTGGTGGGATTCAGAACAAGCAAGAGGTAGAGAAAGCCTTCATAGGCTTATTGGACGGAAGTGGGGAATACACTCTGGTTTATGAGGATAACGAAGGAGACAGGATGCTTGTTGGGGATGTGCCATGGCACATGTTCGTGTCAACAGTGAAAAGGCTGCGTGTACTGAAGAGTTCTGAGCTCCCTGCTTTTACTCGTGGTGGTTGTAAGCAAGACAAAATTACCACTTAA 939 0.4654 MNGRSRNEEAFPQLLDLIPKDREWHENRAHKFSEERKLELRLGPPGEEEDDVVRGRKESLLSLGYFSASVNGGHTQKPVSPPWASSSKTQNINQQKGVSVSSSFLQPQPSPPANTAVPNSSQKRTAPGPVVGWPPIRSFRKNLASSSTSKVVSQHESQNHQQRVVVEDKVAGKKPVADNNNNVAVGGNKSLFVKINMDGVPIGRKVDLNAYYSYEKLSSAVEELFRDLLAAQRDSCGGGIQNKQEVEKAFIGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELPAFTRGGCKQDKITT 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00686 312 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 37 297 IPR003311 GO:0005634|GO:0006355
Accr7g00686 312 MobiDBLite consensus disorder prediction 27 53 - -
Accr7g00686 312 SUPERFAMILY CAD & PB1 domains 183 291 - -
Accr7g00686 312 MobiDBLite consensus disorder prediction 69 126 - -
Accr7g00686 312 Coils Coil 214 234 - -
Accr7g00686 312 Gene3D - 185 305 - -
Accr7g00686 312 FunFam Auxin-responsive protein 186 306 - -
Accr7g00686 312 Pfam AUX/IAA family 38 297 IPR033389 -
Accr7g00686 312 MobiDBLite consensus disorder prediction 69 135 - -
Accr7g00686 312 ProSiteProfiles PB1 domain profile. 190 299 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00686 Accr-Chr7 11025170 11028022 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00686 193 303 B3 DNA Binding Superfamily AT4G23980 34.234 2.10e-13 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Accr7g00686 AUX_IAA 2.2e-69 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00686 K14484 - qsa:O6P43_018220 334.339