Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00675 ATGGTCTTAGTCGCCAAATTGTGCCATGGAAATGAGGCTGATGTCGATAAAGATGGGGACGAGAAATTCGTCCCTCCTCTGAACTTCGCTATGGTGGATAATGACATTTTCAGGGCTGAGTTCCCTGATTCTGCCAACTTCGGATTCTTAAAATCTCTTCGCCTCCGCTCGGTTATATGTTTGTGCCTTGAAACATATCCAGAAGCGACTTTCGAATTTTTGAAGGCTAATGGAATAAGACTTTATCAATTTGGGTTTGATGCCTTCAAGTTTTGTATTGTTTCTGGTCTTAATTGCCACCACTGA 306 0.4216 MVLVAKLCHGNEADVDKDGDEKFVPPLNFAMVDNDIFRAEFPDSANFGFLKSLRLRSVICLCLETYPEATFEFLKANGIRLYQFGFDAFKFCIVSGLNCHH 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00675 101 PANTHER TYROSINE-PROTEIN PHOSPHATASE 23 85 - -
Accr7g00675 101 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 23 90 IPR029021 -
Accr7g00675 101 Gene3D Protein tyrosine phosphatase superfamily 22 95 IPR029021 -
Accr7g00675 101 PRINTS Plant and fungal dual specificity phosphatase signature 60 73 IPR020428 GO:0016791
Accr7g00675 101 PRINTS Plant and fungal dual specificity phosphatase signature 79 93 IPR020428 GO:0016791
Accr7g00675 101 PRINTS Plant and fungal dual specificity phosphatase signature 23 40 IPR020428 GO:0016791
Accr7g00675 101 Pfam Tyrosine phosphatase family 24 87 IPR004861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00675 Accr-Chr7 10451802 10452215 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00675 10 90 Protein tyrosine phosphatase (PTP) family AT1G05000 59.524 2.54e-29 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00675 K18045 - cave:132170485 123.25