Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00638 ATGGCCACAGTATCAGAGCAGCTCGTATGGGAGATCGTGAAGAAGAACAACTGTTTTTTGGTTAAAGAGTTTGGCAGGGGCACTCAGAGCGTTGAGTTCAGCAAAGAGAGCAATAATCTCTACAATCTCAACTCTTTTAAGCACTCTGGTTTGGCAAACAAGAAGACCGTCTCTATCCAACCTGCGGGTAAAGAACAATCTGTGTTGCTTGCAACTACCAAGAAAAAGAAACAGACCCAGCCTTCCTCTTTGCTTCATAAATCTGTCATGAAAAAGGACTTCCCAAGAATGGCAAAGGCTGTGGTAAACCAGGTGGCAGACAACCACTACAGGCCTGATCTCAAGAAGGCAGCCCTTGCAAGGTTGAGTGCTGTTCATAGGAGCATCAAAGTTGCCAAGTCTGGTGTTAAGAAGAGGAACAGACAGGCTGTCAAGGTCCGTGGCAGAAAGTGA 453 0.4614 MATVSEQLVWEIVKKNNCFLVKEFGRGTQSVEFSKESNNLYNLNSFKHSGLANKKTVSIQPAGKEQSVLLATTKKKKQTQPSSLLHKSVMKKDFPRMAKAVVNQVADNHYRPDLKKAALARLSAVHRSIKVAKSGVKKRNRQAVKVRGRK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00638 150 Gene3D - 5 133 - -
Accr7g00638 150 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
Accr7g00638 150 PANTHER 60S RIBOSOMAL PROTEIN L28 1 150 IPR002672 GO:0003735|GO:0005840|GO:0006412
Accr7g00638 150 FunFam 60S ribosomal protein L28 5 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00638 Accr-Chr7 9446781 9450225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00638 1 143 Cytoplasmic Ribosomal Protein Gene Family AT2G19730 69.930 5.33e-73 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00638 K02903 - cave:132165656 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr7g00638 7 9446781 9450225 Accr6g00508 6 10087862 10090293 CCT
Accr6g00508 6 10087862 10090293 Accr7g00638 7 9446781 9450225 ECH
Accr7g00638 7 9446781 9450225 Accr7g00638 7 9446781 9450225 ECH