Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00590 ATGATGAAGGGTTTGATGTTTCAGCAACAACAAGTAGTAGTGGAAGAGAACATGCCTAATTTGACTTCTGCATCTGGTGAGGCCAGTGTTTCCTCAGGCAATAGAAATGAAATTGGTACCAATTATCCTCCACAACAACAATACTTTGCTTCACCATCATCAACTCAGCCTCAGAAGAAAAGGAGAAACCTTCCTGGCAATCCAGACCCAGATGCTGAAGTTATAGCCTTGTCTCCGAAGAGTCTTTTGGCAACAAACAGGTTCATCTGTGAGATCTGCAACAAAGGGTTTCAGAGAGACCAGAATCTTCAGCTTCATAGAAGAGGTCACAATCTGCCATGGAAGCTGAAGCAGAGAACAAACAAAGAAGTGAGGAAGAAGGTGTATGTGTGCCCCGAACCAACTTGTGTGCACCATGACCCAGCAAGAGCACTTGGCGATCTAACTGGGATAAAGAAGCATTTCTGCAGGAAACATGGTGAGAAGAAGTGGAAATGTGATAAGTGCTCTAAGAGGTATGCAGTTCAATCAGATTGGAAAGCTCACTCCAAGACTTGTGGCAAAAGAGAGTACAGATGTGACTGCGGAACCCTCTTCTCAAGGAGGGACAGTTTCATAACACACAGAGCCTTCTGTGATGCATTAGCAGATGAGAGTGCAAGAACAAACCCACTTCTTCATCATCCTCAACCACCTCCCATTATAAGTTCTTCATCTCCAGCACCATCTCACATTCTGAATCTCCAAACCCACCAAGATCTCCATTCTTTACAACTGAAGAAAGAGCATCATCATCAACAACAACAAAGCTTCAATCTTCCTCCATGGCTAGCTCCTGGGCCATCATCCACCATTAATGATCTCTCTTCACCACCACCACCATCTTCAATCTTCGAGCAGGACTTTTCACAAACATCTCAGGGGCACCAGCATGAAAACCCTAACCCTACTTCTACTAGCCTGGGCCCCACCCACCTCCTCCCTCCTCCTCCTGCCTACCAAACAGCGCCTTCCCCGCACATGTCAGCAACAGCCTTGTTGCAGAAAGCAGCACAAATGGGTTCAACCATCACCAAAACTGGCTCTGCCTCTGCCTCTGCCTCTGCCTCCTCCAATATGATTAGGACCCACCACCACACTCACGTGCCTCTTATTCCTCCTCATACTCACTCTTCTGATCCTTCTGCCATCAATTCAAGTAGTGGTAATTTTGGTTTGAATTTGTCATCACATGAATCTGCAGTTCTTCTCTCACCTCCTTCTGCTACTGCTACTGCTTCTGCTTCTTCTTCCTTTCTTCTTCAGGATGTTATGTGTTCTTTCTCGGGTACTTCTGGTGGTGGTGGATTTGAAGGAACGTCTTTTGAGGATGCTTTTGGTGGGATTTTGAGCTCAAAGAATAATAAAGATGGAAGCTTTCTTGATACCCTTACAAAGACAACCACCATCTACGCGGGACATCTAAGTGGCGCCGCCGCCACCGGCAATGACGGTGGTGGAAATGAAGGTTTAACGAGAGATTTCTTGGGTCTTACACCTCTCTCTCATAATGAGATTCTCAGCTTTGCTGGAATTGAAAACTGCGTGAACCCCACCTCCCATGATCATCAGAAGCAATCCCAAAAACCTTGGCAAGGTTAG 1641 0.4607 MMKGLMFQQQQVVVEENMPNLTSASGEASVSSGNRNEIGTNYPPQQQYFASPSSTQPQKKRRNLPGNPDPDAEVIALSPKSLLATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKEVRKKVYVCPEPTCVHHDPARALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGKREYRCDCGTLFSRRDSFITHRAFCDALADESARTNPLLHHPQPPPIISSSSPAPSHILNLQTHQDLHSLQLKKEHHHQQQQSFNLPPWLAPGPSSTINDLSSPPPPSSIFEQDFSQTSQGHQHENPNPTSTSLGPTHLLPPPPAYQTAPSPHMSATALLQKAAQMGSTITKTGSASASASASSNMIRTHHHTHVPLIPPHTHSSDPSAINSSSGNFGLNLSSHESAVLLSPPSATATASASSSFLLQDVMCSFSGTSGGGGFEGTSFEDAFGGILSSKNNKDGSFLDTLTKTTTIYAGHLSGAAATGNDGGGNEGLTRDFLGLTPLSHNEILSFAGIENCVNPTSHDHQKQSQKPWQG 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00590 546 FunFam protein indeterminate-domain 12-like 67 135 - -
Accr7g00590 546 Pfam Zinc-finger double-stranded RNA-binding 88 110 IPR022755 -
Accr7g00590 546 Gene3D Classic Zinc Finger 143 221 - -
Accr7g00590 546 MobiDBLite consensus disorder prediction 259 340 - -
Accr7g00590 546 MobiDBLite consensus disorder prediction 19 73 - -
Accr7g00590 546 SUPERFAMILY beta-beta-alpha zinc fingers 87 184 IPR036236 -
Accr7g00590 546 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 43 531 IPR031140 -
Accr7g00590 546 ProSiteProfiles Zinc finger C2H2 type domain profile. 88 110 IPR013087 -
Accr7g00590 546 SMART c2h2final6 88 110 IPR013087 -
Accr7g00590 546 SMART c2h2final6 129 159 IPR013087 -
Accr7g00590 546 SMART c2h2final6 164 184 IPR013087 -
Accr7g00590 546 FunFam protein indeterminate-domain 5, chloroplastic-like 142 221 - -
Accr7g00590 546 ProSitePatterns Zinc finger C2H2 type domain signature. 90 110 IPR013087 -
Accr7g00590 546 Gene3D Classic Zinc Finger 69 135 - -
Accr7g00590 546 MobiDBLite consensus disorder prediction 223 244 - -
Accr7g00590 546 MobiDBLite consensus disorder prediction 19 62 - -
Accr7g00590 546 MobiDBLite consensus disorder prediction 268 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00590 Accr-Chr7 8537713 8540103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00590 14 533 IDZ Gene Family AT1G55110 46.507 1.61e-130 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr7g00590 zf-C2H2_jaz 8.1e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00590 K25870 - jre:109011738 594.349