Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00543 ATGTTCGTACCAAGGGATTTCATCCCCGTAGATAATGTTGATGATGCCCATAAAGAAGGTGTCCCTCCATCGGGAGAAGAAATGCATCAATTTTTCCTTCCCTTCCGAGGATTCTGTGCTCGAAAAGGGATAGAAGCAAAGGAGTTGGTTCTTCATGACCTTGATGTCTCAAGCGCCCTTACTTATTATATCATTAACAACTCTATCAGAAACGTTGTTGTTGGTGCTTCTCTCCGTAATCTTCTTACGAGGAAATTCTTCAAAGAGGCTGATGTCCCAACTTGCTTAATCAAGTCTTTGCCTGAGGCCTGCACAATATATGTTATATCAAACGGAAAAGTAAAAAATATCAAACCAACACGCCATAGTCTAAATCATTGGATCACAACGACTAAATCAATAAAAGACAGTCAAAGAGGAAGTTCTGGGGCTGGTGATTCACAAAGGCTTCCTTATATCTCAGATTCTGAAGAAGAAATTCTCAGAGATTCAGTCAGACATGGACGTGGACAAGGCTCAGTCCTTGATGGAGCATGTAATAGTCAAAATCATACCTATACACAAAATGTACCGCATGAACCAAATGGAAAAGCTGATTCACCAGAATCAAATCAAAATCCATATTCCTTCATCAATGACATGTCCGGGCCGAATAGTTTTCAATCAAGTGATAAGTTCCCTGAAAACCAAGAAGTTTTCGAGAACTCAGACATTTGCAGGAGCCTAACTTGGAAAAGCCCAAATCGCTTGGAGAGAGAAATAAGGAAATTAAAACGGGAACTGAAAAGAACAATGGAGAAGTATAGTTTAGCTTGCAGAGAAGCTATTGAAACAAAAAGGAAGGTAATGGAGCTTGAACAGATTAGGGAAGAAGAAGGACGCAACCTAGAAAAAGCTAGGCTCGCTGAAGAGGCTGCATTGGCTTTGACAGAGGTAGAAAGAGAGAAAGCCATGGCTGCATCGGAATCATCCCAAATGGCAAAACTCCTAGCAGAAATGGAGACTGAGAAGAGAATGCAGGCAGAAATGAAAGCTATGCAAGAGGAAGAGGAGAAGATGAAAGCAGTAAATCTACTTGCACAAAATTTTATCCGATGTAGAAGATATGATATTTCAGAAATTGAGGTTGCAACAAACTACTTTGACAATTCATTGAAAATTGGTGAAGGTGGATATGGACCTGTTTATAGAGGGAAGCTCGATCACACTGTTGTTGCCATCAAGGTCTTGAGACCAGACATAGCATCTGGGGAGAAGCAATTTTTTCAAGAGGTTGAAGTTTTGAGCACCATAAGACATCCTAACATGGTTCTCCTCCTAGGTGCCTGTCCAGAGTATGGGTGCCTTGTGTACGAATATTTGGAAAATGGCAGCTTAGACGACCGCCTCTTCCGGAAAGATAACACCCCACCAATTCCATGGAAACTTCGATTCCAGATTGCAGCAGAAATTGCCACTGGCCTTCACTTCCTTCACCAGACAAGGCCTGAACCACTGGTTCATCGAGACCTCAAGCCTGCAAATATACTCCTAGACAAGAACTACAAGAGCAAGATCAGTGATGTAGGTTTGGCCAGGCTTGTTCCTCCATCTGTAGCTGACAAAACCACTCAATATCGTTTGACAGCTGCAGCTGGTACATTATGTTATATTGACCCAGAGTATCAAAGAACAGGATTGTTGGGTGTAAAATCAGACACATACTCCTTAGGAGTAGTGCTGCTTCAGATTCTTACGTCAAAGCCTCCTATGGGTTTGTCTCACCTGGTTGAAAGGGCTATCCAAGCGGGCAAATTTCCAGAGGTGCTTGATCCCAGTGTGACAGATTGGCCTGTTGAAGAGGCTTTATCACTTGCTATGTTGGCTATGAAATGTTGTGAATTAAGGAAACGTGACAGACCAAATCTTGGCTCGGTCATTTTGCCGGAGCTGGATCGACTCAAAGATTTGGAAGAAGACAGATATGTGAAAGAAGTCACTGACGGTGATGACAGATTTGAGAGCCGGAACCAAGAGGCAATGAGTAGCAATATTAATGTGGAAATGGAGAGAAGGCAGAGGAAACACGTGAAGTCTCCGAGCAAGAATTGCAGCAGCAGAAGTAAAATAATAAGAGAAGGAGGCCTCTTTGCAACATCAAGAAAACATGTTGAGGAAGTTGCAAACAAGCAAGACAGTACTGATGAGATAGGGAGCTGCTGGTCTTTTGTTGGAACTTGCTCCACCGCCAACTCACTTGCCTCTTAA 2247 0.4259 MFVPRDFIPVDNVDDAHKEGVPPSGEEMHQFFLPFRGFCARKGIEAKELVLHDLDVSSALTYYIINNSIRNVVVGASLRNLLTRKFFKEADVPTCLIKSLPEACTIYVISNGKVKNIKPTRHSLNHWITTTKSIKDSQRGSSGAGDSQRLPYISDSEEEILRDSVRHGRGQGSVLDGACNSQNHTYTQNVPHEPNGKADSPESNQNPYSFINDMSGPNSFQSSDKFPENQEVFENSDICRSLTWKSPNRLEREIRKLKRELKRTMEKYSLACREAIETKRKVMELEQIREEEGRNLEKARLAEEAALALTEVEREKAMAASESSQMAKLLAEMETEKRMQAEMKAMQEEEEKMKAVNLLAQNFIRCRRYDISEIEVATNYFDNSLKIGEGGYGPVYRGKLDHTVVAIKVLRPDIASGEKQFFQEVEVLSTIRHPNMVLLLGACPEYGCLVYEYLENGSLDDRLFRKDNTPPIPWKLRFQIAAEIATGLHFLHQTRPEPLVHRDLKPANILLDKNYKSKISDVGLARLVPPSVADKTTQYRLTAAAGTLCYIDPEYQRTGLLGVKSDTYSLGVVLLQILTSKPPMGLSHLVERAIQAGKFPEVLDPSVTDWPVEEALSLAMLAMKCCELRKRDRPNLGSVILPELDRLKDLEEDRYVKEVTDGDDRFESRNQEAMSSNINVEMERRQRKHVKSPSKNCSSRSKIIREGGLFATSRKHVEEVANKQDSTDEIGSCWSFVGTCSTANSLAS 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00543 748 Coils Coil 282 302 - -
Accr7g00543 748 Gene3D Phosphorylase Kinase; domain 1 359 453 - -
Accr7g00543 748 FunFam Os07g0541700 protein 454 544 - -
Accr7g00543 748 SMART serkin_6 381 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00543 748 SUPERFAMILY Protein kinase-like (PK-like) 362 639 IPR011009 -
Accr7g00543 748 MobiDBLite consensus disorder prediction 171 208 - -
Accr7g00543 748 Pfam Protein kinase domain 384 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00543 748 MobiDBLite consensus disorder prediction 129 149 - -
Accr7g00543 748 ProSitePatterns Serine/Threonine protein kinases active-site signature. 499 511 IPR008271 GO:0004672|GO:0006468
Accr7g00543 748 MobiDBLite consensus disorder prediction 129 152 - -
Accr7g00543 748 Coils Coil 329 356 - -
Accr7g00543 748 ProSiteProfiles Protein kinase domain profile. 381 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00543 748 Coils Coil 247 278 - -
Accr7g00543 748 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 354 453 - -
Accr7g00543 748 Gene3D Transferase(Phosphotransferase) domain 1 454 673 - -
Accr7g00543 748 MobiDBLite consensus disorder prediction 175 208 - -
Accr7g00543 748 PANTHER OS02G0152300 PROTEIN 24 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00543 Accr-Chr7 7699731 7707034 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00543 18 653 Receptor kinase-like Gene Family AT1G78940 46.875 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Accr7g00543 Pkinase 3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00543 - - pcin:129290405 1135.55