Gene search

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00538 299 SMART cbf3 130 191 IPR001289 GO:0003700|GO:0006355
Accr7g00538 299 Gene3D - 131 192 - -
Accr7g00538 299 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 7 253 IPR001289 GO:0003700|GO:0006355
Accr7g00538 299 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 133 188 IPR001289 GO:0003700|GO:0006355
Accr7g00538 299 MobiDBLite consensus disorder prediction 18 37 - -
Accr7g00538 299 ProSitePatterns NF-YA/HAP2 subunit signature. 136 156 IPR018362 GO:0003677|GO:0016602
Accr7g00538 299 PRINTS CCAAT-binding transcription factor subunit B signature 134 156 IPR001289 GO:0003700|GO:0006355
Accr7g00538 299 PRINTS CCAAT-binding transcription factor subunit B signature 165 188 IPR001289 GO:0003700|GO:0006355
Accr7g00538 299 ProSiteProfiles NF-YA/HAP2 family profile. 131 191 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00538 Accr-Chr7 7634847 7637357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00538 5 250 CCAAT-HAP2 Transcription Factor Family AT1G17590 46.825 1.80e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Accr7g00538 CBFB_NFYA 5.8e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00538 K08064 - gmx:100500765 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr7g00538 7 7634847 7637357 Accr7g00538 7 7634847 7637357 ECH