Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00530 ATGGCATTGCCTGATTATGCTTCAATCCTGATCGTAGCAGCACTAATAGCTGCACTCTTATTCTTCAGCCTCACCATGCTTGGTTGGTGTACCTACAGAAGCATTTATCTGATACAATCCATTCCATCCACAAGAACAAACTTTGATGACAAGTTTCAATCCTGGACCCCAAGCCTAGAGTCTCATTCCAAGAAGTTTCAGTACAGAGCTGCAGAAGCTGTACAAGGCACTGATCAGACTGAATGCATCATCTGTTTGGGACCTTTTGAAGAAGAAGAGAGTGTGAGGCAGCTTCATAGCTGCAGACACATCTTTCATACGATCTGCATCGACACTTGGTTCACCTCTCATTCTGGCTGCCCTTTGTGCAGAACCCAGATAGACCATGTGCCACCTTCTCCAAATGTGATTGAGGAAGAGTCCATTTCCAGAAGGTCTGTGGCGTCAGAGGAAAATGACCCGAGTCAGACAGTCTTGTTCATTGTTGGCTCCTGA 495 0.4586 MALPDYASILIVAALIAALLFFSLTMLGWCTYRSIYLIQSIPSTRTNFDDKFQSWTPSLESHSKKFQYRAAEAVQGTDQTECIICLGPFEEEESVRQLHSCRHIFHTICIDTWFTSHSGCPLCRTQIDHVPPSPNVIEEESISRRSVASEENDPSQTVLFIVGS 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00530 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 44 130 IPR013083 -
Accr7g00530 164 Pfam Ring finger domain 81 124 IPR001841 -
Accr7g00530 164 SMART ring_2 82 123 IPR001841 -
Accr7g00530 164 CDD RING-H2_EL5-like 81 124 - -
Accr7g00530 164 ProSiteProfiles Zinc finger RING-type profile. 82 124 IPR001841 -
Accr7g00530 164 SUPERFAMILY RING/U-box 65 132 - -
Accr7g00530 164 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 8 131 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00530 Accr-Chr7 7543126 7543620 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00530 66 157 C3H Transcription Factor Family AT5G17600 40.860 8.22e-17 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00530 - - pcin:129290944 229.18