Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00520 ATGATACAATCCATTCCATCCACAAGAACAAACTTTGATGACAAGTTTCAATCTTGGACCCCAAGCCTAGAGTCTCATTCCAAGACGTTTCAGTACAGAGCCGCAGAAGCTGTACAAGGCACTGATCAGACTGAATGCATCATCTGTTTGGCACCTTTTGAAGAACAAGACAGCGTGAGGAAGCTTCGTAGGAGCAGACACATCTTTCATACGATCAGCATCGACACTTGGTCCGCCTCTCATTCTGGCTGCCCTTTGTGCAGAACCCAGATAGACTATGTGCCACCTTCTCCAAATGTGATTGAGGAAGTGTCCATTTCCAGAAAGTCTGTGGCTTCAGAGGAAAATGACCCAAGTCGGACGGTTTTGTTCCTTGTCGGCTCCTGA 387 0.4703 MIQSIPSTRTNFDDKFQSWTPSLESHSKTFQYRAAEAVQGTDQTECIICLAPFEEQDSVRKLRRSRHIFHTISIDTWSASHSGCPLCRTQIDYVPPSPNVIEEVSISRKSVASEENDPSRTVLFLVGS 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00520 128 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 22 94 IPR044675 -
Accr7g00520 128 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 8 93 IPR013083 -
Accr7g00520 128 Pfam Ring finger domain 45 88 IPR001841 -
Accr7g00520 128 SUPERFAMILY RING/U-box 33 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00520 Accr-Chr7 7419549 7419935 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00520 10 121 C3H Transcription Factor Family AT5G17600 35.398 4.41e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00520 - - pcin:129290944 169.474