Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00481 ATGCCTCGTTCCAGAAGATTTCTCCTGAAAAGCTTCGTTCTTGGCTGTTTCAGAGCCAGTCAATCTTCTTCAACCTTGTGCTCTGCAACTAAAAATCACAGTCATCGTCATCATCACAGGAACAATAAGTGCTTGGCCTCCAGTAAGGTTAGCTCAAGAAGATTGTGTCTTTCTGATATGAGCAATTCTTCTTCTCTCTCTATCATGAGTGATCTTTCAAACTCTGTTCTGGGTTCAAATCTTCATATCTTCACCCTCAAAGAGCTCAAAGAGATTACCCAAAATTTCTGCAAATCCAGTGTTCTTGGTGAAGGTGGGTTTGGTAAAGTTTATAAAGGTTTCATTGATGATAAGCTTAGGCCTGGTTTAGAAGCTCAAGTTGTTGCAGTTAAGGTTCTTGATTCAGATAGCAAACAGGGACACAGAGAGTGGTTGGCTGAAGTAATATTTTTGGGGCAACTGAAGCATCCTCATCTGGTGAACTTGATTGGATATTGCTGTGAAGATGAACACAGACTTTTGGTTTACGAATACATGGAGAGAGGCAATTTAGAGAACAAGCTTTTCAAGGGTTACTTAGCAGCCTTACCTTGGCTCACAAGAATCAAAATAGCCATTGGGGCTGCAAAAGGACTTGCTTTCCTTCATGAAGAAGACCAACCTGTCATCTACAGAGACGTCAAAGCCTCAAACATCTTATTAGATGCAGATTACAATGCCAAGCTCTCTGATTTCGGTCTCGCCATAGATGGCCCAGAAGAGGACCAAATTCATATCACAACTAGTGTTATGGGTACTCATGGTTATGCTGCTCCTGAATACATCACATCTGGGCATTTGACAACCATGAGCGATGTGTATAGCTTCGGGGTGGTTCTGTTAGAGCTGATCACAGGGAAGAGATCAGTGGATAAGAACCGTCCGATCAGAGAACAGGATTTGGTGGAATGGGCAAGACCATTGTTAAAGGACCCTAATAAGCTTGAAAGAATAATGGACCCAAGACTAGAGGGTCAACACTCTTATGAAGGGGCTAGAAAAATGGCGTATTTGGCTTACCAATGTCTGAGTCAACAACCCAAATCTAGACCTTCCATGCGAGCCGTGGTTAAGGCCTTAGAGCCACTTATGAACCTGACTGATATAATTGGCTACTTTGTCTATGTGGTCCCATGTGAAGAAAATAAACCAGTTCAATGCGGGAATGGGTGTGAACAGAAGAAGAAGGAGGAGGAGGAGGAGGAGGAGATGAAGAAGGAGACGACGACGACAACGACAACGAAGAAGAAGAAGATGGCTGGGGAGGGTGTTCAGAGGAATCGAAAGGTTCAAAGACGAAAGCGTCAGATTAAGTTGCTGAGGTCATCTGGTTCAGTTCATTCAGACACTGCTCTGTACAAAGTTCTTGGTTCTAGTCTTTATTCTTCAAAGCAAGCAACATAA 1443 0.4304 MPRSRRFLLKSFVLGCFRASQSSSTLCSATKNHSHRHHHRNNKCLASSKVSSRRLCLSDMSNSSSLSIMSDLSNSVLGSNLHIFTLKELKEITQNFCKSSVLGEGGFGKVYKGFIDDKLRPGLEAQVVAVKVLDSDSKQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMERGNLENKLFKGYLAALPWLTRIKIAIGAAKGLAFLHEEDQPVIYRDVKASNILLDADYNAKLSDFGLAIDGPEEDQIHITTSVMGTHGYAAPEYITSGHLTTMSDVYSFGVVLLELITGKRSVDKNRPIREQDLVEWARPLLKDPNKLERIMDPRLEGQHSYEGARKMAYLAYQCLSQQPKSRPSMRAVVKALEPLMNLTDIIGYFVYVVPCEENKPVQCGNGCEQKKKEEEEEEEMKKETTTTTTTKKKKMAGEGVQRNRKVQRRKRQIKLLRSSGSVHSDTALYKVLGSSLYSSKQAT 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00481 480 Gene3D Phosphorylase Kinase; domain 1 58 178 - -
Accr7g00481 480 FunFam Serine/threonine-protein kinase BIK1 63 178 - -
Accr7g00481 480 Gene3D Transferase(Phosphotransferase) domain 1 179 383 - -
Accr7g00481 480 ProSitePatterns Protein kinases ATP-binding region signature. 102 131 IPR017441 GO:0005524
Accr7g00481 480 MobiDBLite consensus disorder prediction 402 458 - -
Accr7g00481 480 SMART serkin_6 96 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00481 480 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 179 382 - -
Accr7g00481 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Accr7g00481 480 CDD STKc_IRAK 102 376 - -
Accr7g00481 480 SUPERFAMILY Protein kinase-like (PK-like) 71 374 IPR011009 -
Accr7g00481 480 Pfam Protein tyrosine and serine/threonine kinase 100 373 IPR001245 GO:0004672|GO:0006468
Accr7g00481 480 ProSiteProfiles Protein kinase domain profile. 96 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00481 480 PANTHER OS01G0588500 PROTEIN-RELATED 46 376 - -
Accr7g00481 480 MobiDBLite consensus disorder prediction 403 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00481 Accr-Chr7 6533130 6534994 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00481 82 373 Glycoside Hydrolase AT3G07070 51.525 8.94e-100 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Accr7g00481 PK_Tyr_Ser-Thr 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00481 - - qsa:O6P43_027541 575.859