Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00475 ATGAACTACCAACGATATTTGAAGTTGTTACGGGTACATCAAAGAAACAACTTCAGGAGAAGTCTTTCAAATCATGGTGGCAATAAATCAAGGTCCAACTCTAAAGCGCGAGGTTCAGAATCTGTGGGAAAGCATTCAAAGGCTATGCAAACAAGAGACGAGGAAGCAGAACTGGATGAAGTAGATGAAGAAGATGAACATGGAGAGACTTTGTGCGGGGCATATGTTGAGAATTATGGTACTGATGAATTCTGGATTTGTTGCAACATCTGCGAAAAATGGTTCCATGGAAAATGTGTGAAGATCACCCCAGCTAGGGCAGAGCATATCAAACAATACTTGCCCATCATGCAGTAA 357 0.4146 MNYQRYLKLLRVHQRNNFRRSLSNHGGNKSRSNSKARGSESVGKHSKAMQTRDEEAELDEVDEEDEHGETLCGAYVENYGTDEFWICCNICEKWFHGKCVKITPARAEHIKQYLPIMQ 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00475 118 Pfam PHD-finger 71 111 IPR019787 -
Accr7g00475 118 SUPERFAMILY FYVE/PHD zinc finger 42 109 IPR011011 -
Accr7g00475 118 PANTHER CPG BINDING PROTEIN 20 113 IPR045104 GO:0006355|GO:0042393
Accr7g00475 118 FunFam PHD finger alfin-like protein 64 115 - -
Accr7g00475 118 MobiDBLite consensus disorder prediction 38 54 - -
Accr7g00475 118 MobiDBLite consensus disorder prediction 18 37 - -
Accr7g00475 118 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 115 IPR013083 -
Accr7g00475 118 MobiDBLite consensus disorder prediction 18 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00475 Accr-Chr7 6376078 6377173 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00475 19 113 Alfin-like Transcription Factor Family AT3G42790 65.263 2.33e-32 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Alfin-like Accr7g00475 PHD 1.1e-07 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00475 K26274 - mnt:21387296 146.362