Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00452 ATGGCTAATTCTTCCATGGATTTTGTGTCGTCCTTCTCCTCCATCTCAGCTTCCAATTCACGCCGCTACTACCCATCTCTTGCAAGCTCTTACAACACCTCTTTCTCCTTCACAGCCTCTACCTCTCACGTCGACGTAAGAGCTCCTCCCACCTCACCGTTTCATTCAGATCTTGAACATTCTTGGAAAGAAGAAATTTCATGGCAGATTGAGCTCAATGAGAGACTCAACTACCCTAAAACCCTCGGCTCTGCTCTGAGTCCATTGCATGGGAGCTCCCCGTCACCTTCAAGTCTCAGCCAGACATCTCGTCGAACACCTAATAACCACCATCACCATCCTCGAACGCACGAAAACTACGCTACGAGTGAAAGTGAGATGGGTTATTACAGTGAGAGTGATGATGAGGAGAAGGAGGAGGCCGTTTCAGGAAGAAGAAGAGTGGGGTTGATGGGGTTGTTTAGGTACTCAACAAAGTGGGATATGGTGGTAGTGATGATGGGGTGTGTTGGGGCGATCATTAATGGCGGATCACTGCCTTGCTATTCGTATCTGTTTGGTGAGTTGGTCACTAAGATTGCTTCTGAAGCATTGGCCGGCAACAAAACCCAGATGCTCAGGGACGTCCAACAGGTGTGCATATATATGGTCGGGTTAGCTGCAGTGGTGCTAATAGGAGCATATCTAGAGATCACATGTTGGAGGTTGGTGGGGGAAAGATCTGCTCAGAGAATAAGAAGAGAGTATTTGAAAGCAATTCTTAGGCAAGACATTGCCATTTTTGACACAGAGATGAGCACTGGTGATATCATGCATGGAATTGCAAGTGATGTTGCTCAAATTCAAGATGTCATGGGAGAGAAGATGGCTCATTTCATTCATCATATATTTACATTCATTTGTGGGTACACAGTTGGGTTTCTAAGGTCATGGAAGGTCTCTCTGGTGGTTTTATCAGTTACCCCTCTCACTCTTTTCTCCGGCATAGCCTACAAAGCTGTTTATGGAAGTCTAACAGCAAAAGAGGAAGCTTCATATAGGGAAGCAGGAAGCATAGCAGAGCAGGCCATAAGATCAATCAGGACACTGTTTGCTTTTGTTGCAGAAGGCCAAATGGGTTCAAAATACAGAGAAGTACTGCAAAAATCAGAGGCATTTGGGGCAAAGCAAGGGTTTGCAAAAGGTGGAGGCATGGGATTAATCTACTTAATAACCTACTCAACATGGGCATTGGCTTTCTTTTATGGGTCCCTCTTAATTGCCAGAAATGAGATTGATGGAGGTGCAGCTATTTCTTGTTTCTTTGGTGTTAATATTGGAGGAAGAGGCTTGGCACTGGCACTTTCATATTATGCACAATTTGCACCAGGCACCGTTGCAGCAAGTCATGTATTTGAAATGATAGAGAGAATTCCTGAGATTGATCCATACAGCTCTGAAGGAAAGAAACTTGCCAATGTTAATGGAATAATTGAGTTCAAGAATGTCAGCTTTGCATACCCATCTCGTCCTGATGCTCCCATTCTTCGGTCCCTTAACCTAGTCATTTCTTCTGCAACAACCCTAGCCTTGGTTGGCCCCAGTGGAGGAGGCAAGTCTACCATCTTTGCTCTCATAGAGAGGTTTTATGATCCCATTGAAGGGGTAATAACCTTGGATGGTCATGATTTGAGAAGCTTTCAAGTCAAATGGCTAAGAGATCAAATTGGAATGGTAGGTCAGGAGCCAATTCTTTTTGCCACAACCATACTTGAGAATGTCATGATGGGAAAAGAAAATGCCACTAAGGAAGAGGCAGTTAATGCTTGCATTGCTGCTGATGCCCACAGCTTTATCTCTAGCCTACCACTAGGCTATTACACTGAGGTTGGGGATAGGGGAACCCAACTCTCAGGAGGTCAAAAACAGCGAATTGCAGTGGCTCGAGCCATGATTAAAAATCCTAAACTACTACTCTTAGATGAACCTACCAGCGCACTTGATGCTGAGTCGGAGTCTATAGTCCAAAAAGCTATCGACAAGATTTCTGCTGGCCGGACCACCATTGTTATTGTTCACAGGATTGCAACAGTAAGGAACGCTCATACCATTGTAGTTCTTGAATGTGGTTCTGTGACTGAGATTGGTGATCATCACCAGCTTATGAGAAAAGCTGGCACATATTATAATCTCGTCAAGCTTGCTTCTGATGAATCTGATCCCACTTCAAAACCTAGTCCTGAAGAGTATGTCACACAAAAGGCTAATGACTTTTCTGTCCATAAGAAATCATTTTCAGATATCTCAAGGTTCACTTCTAAGTACTCAATATCCCTGTATGAAGAAGAGCTAGAAGATAAGGATCATATAAAAAATAAAAATCCAAGAAAGTTCAAACTCTATGAGATATGGAAACTGCAAAAGCCAGAGCTTGTGATGCTATTATTGGGATTCCTTCACGGTATGTTTGCAGGTGCTTTCTTGTCCCTTTTCCCCTTGATTTTAGGCATGGCCCTTGAAGCATATTTTCATGAAGACACTTCAAAGATGAGAAGAAATGTTGGTCACCTTTGTCTGGCACTTGTTGGTCTTGGTTTTGGATGCATCATCTCCATGACAGGACAACAAGGCTTGTGTGGCTGGGCTGGCGCAAAACTCACATTAAGGGTCAGAGACTTTCTTTTTCAGGCCATATTAAAACAAGAACCAGGATGGTTTGATTTCGAAGAAAACTCCACTGGCGTGTTAGTTTCAAGGTTGTCCATTGATTGTGTTAGCTTTCGTTCAGTTCTTGGCGATAGATTTTCCGTCCTTTTAATGGGGTTAAGTTCAGCTGCCGTAGGGTTTGGTGTATCCTTTTCCCTTGAATGGAGATTGGCCCTTCTGGCTGCTGCTTTGGCCCCATTTACTCTTGGTGCTAGCTACTTGAGTTTGATCATAAACATAGGGCCAAAAGTTGATAACAATTCTTATGCCAGAGCTAGTAATATTGCTTCTGGTGCAGTTTCAAACATAAGGACAGTCACAACTTTATCTGCCCAAGAACAAATAGTAACGTCCTTTGATCAAGCCTTGTTAGAGCCTAGGACAAAATCTGTAAAGAAGTCACAAATTCTAGGCCTAACACTTGGGATTTTTCAGGGAGCCATGTATGGAGCATACACATTAATTCTTTGGTTTGGCGCCTACCTTGTCAAACAGAACAAAACAGAATTTGGAGATGTTTACAAGATCTTCCTCATTCTTGTTTTGAGCTCATTTTCTGTGGGACAACTTGCAGGCTTAGCACCAGATACTTCCATGGCAGCTACAGCAATTCCTGCAGTTCTAGGTATCATAGACCGTAGGCCATTAATAGGCGATAATAGAACAAAGGGTAAGAAGATAGAAAGATCAAGATCAAAGTCATTGGAGATAGAGTTCAATAAGGTGACATTTTGTTACCCATCTAGGCCTCTGGTGATTGTATTGAAGGATTTCAATTTGAAGGTGAAAGCAGGAAGCACAGTGGCTTTAGTGGGGCCAAGTGGGTCAGGAAAATCAACAGTGATATGGATGATACAGAGATTCTATGATCCAAATGAAGGAAAAGTGATGATTGATGGGTTGGATTTGAGAGAGATTGATGTAAAATGGTTGAGGAGACAAATGGCTTTGGTGAGTCAAGAGCCTGCACTTTTTGCTGGGAGCATTACGGAGAATATTGCCTTTGGGAGTGTAAATGCTACATTCACAGAAATTGAAGAGGCTGCAAGGAAAGCTCAAGTTCACAATTTCATAAGTGGCCTTCCTCAAGGTTATGAAACCCAGGTAGGTGAGAGTGGGGTCCAGTTATCAGGAGGGCAAAAGCAAATGATAGCAGTAGCAAGAGCCATATTGAAGAGATCAAGGGTGTTATTGCTTGATGAAGCAAGCAGTGCCTTGGACTTAGAGTCAGAGAAACTTATTCAAATTGCTCTAAGAAATGTGGCAAAAGAAGCAACAACCATAGTGGTGGCTCATCGTCTAACTACAATCAGAGAAGCTCAAATGATTGCAGTTATGGAAGATGGTACTGTGGTGGAGTCTGGTAGCCATGAAACTCTCATGGCTTCCTATGGTGATGGTTTGTATGCTAGCTTTGTTCGTGCCCAGACTCAAGCCTATGCCTTTTCTGCTTCATAG 4143 0.4308 MANSSMDFVSSFSSISASNSRRYYPSLASSYNTSFSFTASTSHVDVRAPPTSPFHSDLEHSWKEEISWQIELNERLNYPKTLGSALSPLHGSSPSPSSLSQTSRRTPNNHHHHPRTHENYATSESEMGYYSESDDEEKEEAVSGRRRVGLMGLFRYSTKWDMVVVMMGCVGAIINGGSLPCYSYLFGELVTKIASEALAGNKTQMLRDVQQVCIYMVGLAAVVLIGAYLEITCWRLVGERSAQRIRREYLKAILRQDIAIFDTEMSTGDIMHGIASDVAQIQDVMGEKMAHFIHHIFTFICGYTVGFLRSWKVSLVVLSVTPLTLFSGIAYKAVYGSLTAKEEASYREAGSIAEQAIRSIRTLFAFVAEGQMGSKYREVLQKSEAFGAKQGFAKGGGMGLIYLITYSTWALAFFYGSLLIARNEIDGGAAISCFFGVNIGGRGLALALSYYAQFAPGTVAASHVFEMIERIPEIDPYSSEGKKLANVNGIIEFKNVSFAYPSRPDAPILRSLNLVISSATTLALVGPSGGGKSTIFALIERFYDPIEGVITLDGHDLRSFQVKWLRDQIGMVGQEPILFATTILENVMMGKENATKEEAVNACIAADAHSFISSLPLGYYTEVGDRGTQLSGGQKQRIAVARAMIKNPKLLLLDEPTSALDAESESIVQKAIDKISAGRTTIVIVHRIATVRNAHTIVVLECGSVTEIGDHHQLMRKAGTYYNLVKLASDESDPTSKPSPEEYVTQKANDFSVHKKSFSDISRFTSKYSISLYEEELEDKDHIKNKNPRKFKLYEIWKLQKPELVMLLLGFLHGMFAGAFLSLFPLILGMALEAYFHEDTSKMRRNVGHLCLALVGLGFGCIISMTGQQGLCGWAGAKLTLRVRDFLFQAILKQEPGWFDFEENSTGVLVSRLSIDCVSFRSVLGDRFSVLLMGLSSAAVGFGVSFSLEWRLALLAAALAPFTLGASYLSLIINIGPKVDNNSYARASNIASGAVSNIRTVTTLSAQEQIVTSFDQALLEPRTKSVKKSQILGLTLGIFQGAMYGAYTLILWFGAYLVKQNKTEFGDVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLGIIDRRPLIGDNRTKGKKIERSRSKSLEIEFNKVTFCYPSRPLVIVLKDFNLKVKAGSTVALVGPSGSGKSTVIWMIQRFYDPNEGKVMIDGLDLREIDVKWLRRQMALVSQEPALFAGSITENIAFGSVNATFTEIEEAARKAQVHNFISGLPQGYETQVGESGVQLSGGQKQMIAVARAILKRSRVLLLDEASSALDLESEKLIQIALRNVAKEATTIVVAHRLTTIREAQMIAVMEDGTVVESGSHETLMASYGDGLYASFVRAQTQAYAFSAS 1380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00452 1380 FunFam ATP-binding cassette transporter, subfamily B, member 2, group MDR/PGP protein PpABCB2 981 1121 - -
Accr7g00452 1380 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1128 1371 IPR027417 -
Accr7g00452 1380 ProSitePatterns ABC transporters family signature. 630 644 IPR017871 GO:0005524|GO:0016887
Accr7g00452 1380 CDD ABC_MTABC3_MDL1_MDL2 1132 1371 - -
Accr7g00452 1380 SMART AAA_5 1159 1352 IPR003593 GO:0016887
Accr7g00452 1380 SMART AAA_5 518 690 IPR003593 GO:0016887
Accr7g00452 1380 MobiDBLite consensus disorder prediction 85 140 - -
Accr7g00452 1380 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 491 727 IPR003439 GO:0005524
Accr7g00452 1380 Pfam ABC transporter 1150 1298 IPR003439 GO:0005524
Accr7g00452 1380 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 168 455 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr7g00452 1380 MobiDBLite consensus disorder prediction 86 105 - -
Accr7g00452 1380 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1132 1368 IPR003439 GO:0005524
Accr7g00452 1380 SUPERFAMILY ABC transporter transmembrane region 153 475 IPR036640 GO:0005524|GO:0016020
Accr7g00452 1380 Gene3D ABC transporter type 1, transmembrane domain 1096 1374 IPR036640 GO:0005524|GO:0016020
Accr7g00452 1380 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 814 1094 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr7g00452 1380 SUPERFAMILY ABC transporter transmembrane region 788 1110 IPR036640 GO:0005524|GO:0016020
Accr7g00452 1380 Pfam ABC transporter transmembrane region 807 1078 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr7g00452 1380 Pfam ABC transporter transmembrane region 166 439 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr7g00452 1380 PANTHER ABC TRANSPORTER B FAMILY 133 727 IPR039421 -
Accr7g00452 1380 Gene3D ABC transporter type 1, transmembrane domain 152 1095 IPR036640 GO:0005524|GO:0016020
Accr7g00452 1380 Pfam ABC transporter 509 658 IPR003439 GO:0005524
Accr7g00452 1380 CDD ABC_6TM_Pgp_ABCB1_D2_like 797 1112 - -
Accr7g00452 1380 FunFam ABC transporter B family member 1 1121 1372 - -
Accr7g00452 1380 CDD ABC_6TM_Pgp_ABCB1_D1_like 168 464 - -
Accr7g00452 1380 CDD ABC_MTABC3_MDL1_MDL2 491 728 - -
Accr7g00452 1380 FunFam ABC transporter B family member 4 481 733 - -
Accr7g00452 1380 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 482 726 IPR027417 -
Accr7g00452 1380 ProSitePatterns ABC transporters family signature. 1271 1285 IPR017871 GO:0005524|GO:0016887
Accr7g00452 1380 Gene3D - 1119 1372 IPR027417 -
Accr7g00452 1380 Gene3D - 481 729 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00452 Accr-Chr7 6013151 6020763 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00452 810 1375 Calmodulin-binding Proteins AT2G36910 37.324 6.98e-104 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00452 K05658 - gmx:100816700 1789.62