Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00420 ATGGCGATGCATTCTGGGAACTCATTCAGCCGTTCCGGTGAGCTAGACGAAGCCGAGAATCAACTCTTTCGTCACAAGACACGTAAGCGCATGATCATCCTCATCCTCTCCTCCATAGTTCTCAGCGTCGTGGTCGTCGCCACCATCGCCGGAACCCTCATCCACGCGCATGACACCCCATCCTCTTACTCTGCCCCTTCTTCTCTTGAGTTAACTCCGGCCGCCTCAATCAAAGCCGTCTGCAACGTCACTCGCTACCCTAACTCGTGCATCTCCGGCATCTCCTCCCATCCTAGTTACTTCAACACCACTGACCCCGAAATGCTCTTCATGTTCTCTCTGCGCGTCGCCATTGACGAGCTCTCGAAGCTCGCGGCCTACCTTGCCAAGCTCAGAGGCAGTGTAAAGGACCAAAGTATAAAGACGGCCCTTGATGTCTGTGGAAATGTTCTAGAAGATGCAGCGGATCGGCTCAACGACTCGATTTCATCGCTGGAACTTGGAGGAGGCGAGGCGATTCTAACGCCGGCAAAGATCGACGACCTTAGGACGTGGCTAAGCGCCACGGTTACGGATCAGGAGACTTGTTTGGACGCCATTGAGGAATTGAATTCCACAGATGCTCAAGAGATTCTTCGTGATATGAGAACCGCTATGGAGAACTCTACAGAATCTTCGAGTAATAGTTTGGCCATTGTTAGGAAGATTCTTCGGGTGCTTGCGAAGGTTCACCTCCCGCTCCATCGGAGGCTACTCGGGACGGGCTATCCCGAGTGGGTTGGCCCGACAGAGCGGAGGCTGCTGCAGCAAGAGGCGAACAGAACGACGATGGCAGATGCAGTGGTGGCGAAGGACGGAACTGGACAGTATAGGACGATCAATGAGGCGGTGGCGGCCGTGAAGGAGAAGAGTGAGAGTAGATTTGTGATTTATGTGAAGGAAGGTGTTTACGTGGAAAATGTAGAATTGAAGAAGGACATGTGGAATGTGATGATTATCGGAGACGGGAAAAACAAAACCGTAATCTCCGGCAGGCGGAATAGTGTCGACGGCGCACCCACTTTTGACACTGCCACTTTCGCTGTAAGCGGGAAGGGATTCATAGCCAAAGACATCGGATTCGTCAACAATGCAGGGCCGGCCAAACAACAAGCGGTGGCTATGCGATCAGGTTCCGACAAGTCGGTGTTCTACCGATGCTCCTTCGATGCCTTCCAGGACACCCTCTACGCCCATTCTAACCGTCAGTTCTACCGGGAATGTGACATCACCGGCACCATCGACTTCATATTCGGCAACGCAGCTTCAGTTTTCCAGAACTGCACCATCATACCCAGAGAGCCACTTCCCGGCCAGTTCAACACCGTCACAGCTCAGGGAAAGACCGATCCAAATCAGAACACTGGCATTGTAATCCACGACTCTTCAATTTCTGCGCTTGATAATCTCACTGCTTCCACATACCTTGGAAGGCCTTGGAAAAATTACTCTACCACCGTTATAATGAAGTCTGAGATTGGGCCTTTCTTGGACCCGATGGGATGGACCGAATGGTCCACTGATGTGGAGGCTCCCAGCACTATATTTTATGCTGAGTATCAGAATACTGGGCCAGGCTCAAATGTGACCCAGAGGGTTAGATGGGCCGGTTATAAGCCGAACCTCTCGGAAGATGAGGCTAGGAAGTTCTCGGTTGGGTCATTTATCCAAGCGAGCCAGTGGCTGCCTGATACAGGCGTGGAGTTTCAATCCTCGTTATAA 1761 0.5202 MAMHSGNSFSRSGELDEAENQLFRHKTRKRMIILILSSIVLSVVVVATIAGTLIHAHDTPSSYSAPSSLELTPAASIKAVCNVTRYPNSCISGISSHPSYFNTTDPEMLFMFSLRVAIDELSKLAAYLAKLRGSVKDQSIKTALDVCGNVLEDAADRLNDSISSLELGGGEAILTPAKIDDLRTWLSATVTDQETCLDAIEELNSTDAQEILRDMRTAMENSTESSSNSLAIVRKILRVLAKVHLPLHRRLLGTGYPEWVGPTERRLLQQEANRTTMADAVVAKDGTGQYRTINEAVAAVKEKSESRFVIYVKEGVYVENVELKKDMWNVMIIGDGKNKTVISGRRNSVDGAPTFDTATFAVSGKGFIAKDIGFVNNAGPAKQQAVAMRSGSDKSVFYRCSFDAFQDTLYAHSNRQFYRECDITGTIDFIFGNAASVFQNCTIIPREPLPGQFNTVTAQGKTDPNQNTGIVIHDSSISALDNLTASTYLGRPWKNYSTTVIMKSEIGPFLDPMGWTEWSTDVEAPSTIFYAEYQNTGPGSNVTQRVRWAGYKPNLSEDEARKFSVGSFIQASQWLPDTGVEFQSSL 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00420 586 NCBIfam pectinesterase inhibitor domain 64 236 IPR006501 GO:0004857
Accr7g00420 586 CDD PMEI-like_3 79 219 - -
Accr7g00420 586 FunFam Pectinesterase 73 237 - -
Accr7g00420 586 ProSitePatterns Pectinesterase signature 2. 423 432 IPR033131 -
Accr7g00420 586 PANTHER PECTINESTERASE 37 576 - -
Accr7g00420 586 SMART PMEI_2 72 232 IPR006501 GO:0004857
Accr7g00420 586 Gene3D - 273 586 IPR012334 -
Accr7g00420 586 FunFam Pectinesterase 273 586 - -
Accr7g00420 586 Gene3D Invertase/pectin methylesterase inhibitor family protein 74 236 IPR035513 -
Accr7g00420 586 ProSitePatterns Pectinesterase signature 1. 304 323 IPR018040 -
Accr7g00420 586 Pfam Plant invertase/pectin methylesterase inhibitor 76 232 IPR006501 GO:0004857
Accr7g00420 586 Pfam Pectinesterase 279 571 IPR000070 GO:0030599|GO:0042545
Accr7g00420 586 SUPERFAMILY Pectin lyase-like 278 583 IPR011050 -
Accr7g00420 586 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 77 237 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00420 Accr-Chr7 5566238 5568259 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00420 3 580 Carbohydrate Esterase AT1G53840 54.407 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00420 - - qsa:O6P43_027479 746.888